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Apol7c
Gene Detail
Symbol

Name
ID
Apol7c
apolipoprotein L 7c
MGI:1920912
Synonyms
2210421G13Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 15
36.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:77524867-77533315 bp, - strand
From Ensembl annotation of GRCm38

  8449 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40940  Vertebrate Homology Class
4 mouse; 2 rat; 1 dog

Gene Tree: Apol7c

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Radiation induced(1)
Genomic Mutations involving Apol7c (1)
Incidental mutations (data from APF )
Interactions
Apol7c interacts with 129 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (1 annotations)
Component cellular_component
External Resources: FuncBase
Expression
cDNA source data(25)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(25) cDNA(25)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000044309 (Evidence)
Entrez Gene108956 (Evidence)
UniGene86391
DFCITC1580479
DoTSDT.110825553, DT.101370980
Consensus CDS ProjectCCDS37127.1
International Mouse Knockout Project StatusApol7c
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044309 Ensembl Gene Model | MGI Sequence Detail 8449 C57BL/6J ±  kb
transcript ENSMUST00000062562 Ensembl | MGI Sequence Detail 2044 Not Applicable 
polypeptide ENSMUSP00000050745 Ensembl | MGI Sequence Detail 369 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(117 from dbSNP Build 137)    SNPs within 2kb including multiple locations(149)
Protein-related
information
ResourceIDDescription
InterPro IPR008405 Apolipoprotein L
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(18)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory