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Apol7c Gene Detail
Summary
  • Symbol
    Apol7c
  • Name
    apolipoprotein L 7c
  • Synonyms
    2210421G13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920912
    NCBI Gene: 108956
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:77524852-77533316 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 36.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    100 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920912
protein coding gene Chr15:77524852-77533334 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022022
protein coding gene Chr15:77554704-77564026 (-)
A/J MGP_AJ_G0021987
protein coding gene Chr15:74814392-74825744 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0021991
protein coding gene Chr15:74924560-74932727 (-)
C3H/HeJ MGP_C3HHeJ_G0021765
protein coding gene Chr15:77157774-77164950 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022435
protein coding gene Chr15:80767367-80778446 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019963
protein coding gene Chr15:71567107-71573423 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0021854
protein coding gene Chr15:74373120-74378262 (-)
FVB/NJ MGP_FVBNJ_G0021834
protein coding gene Chr15:73281260-73318711 (-)
LP/J MGP_LPJ_G0021928
protein coding gene Chr15:77872157-77878355 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021860
protein coding gene Chr15:88521561-88527215 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0021022
protein coding gene Chr15:74390996-74396170 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0021333
protein coding gene Chr15:77088395-77096589 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Genomic Mutations
    4 involving Apol7c
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044309 Ensembl Gene Model | MGI Sequence Detail 8465 C57BL/6J ±  kb
transcript ENSMUST00000062562 Ensembl | MGI Sequence Detail 2060 Not Applicable  
polypeptide ENSMUSP00000050745 Ensembl | MGI Sequence Detail 369 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR008405 Apolipoprotein L
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Diseases 1
    Gene Ontology 1
    Phenotypes 20
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory