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Tmem138
Gene Detail
Symbol

Name
ID
Tmem138
transmembrane protein 138
MGI:1920232
Synonyms
1700113I01Rik, 2900055D14Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 19
6.60 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr19:10570478-10577362 bp, - strand
From Ensembl annotation of GRCm38

  6885 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9518  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TMEM138
Gene Tree: Tmem138

Human
homologs
TMEM138, transmembrane protein 138
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 51524
neXtProt AC: NX_Q9NPI0

Human Synonyms: HSPC196

Human Chr (Location): 11q12.2; chr11:61362001-61376502 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human TMEM138

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(5) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Tmem138 interacts with 76 markers (Mir10a, Mir25, Mir30a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process cell projection organization, cilium assembly
Component cell projection, cilium, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (97)    Tissues (10)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 97
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tmem138    NEW 
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000024666 (Evidence)
Entrez Gene 72982 (Evidence)
DFCI TC1633929, TC1590878, TC1582569
NIA Mouse Gene Index U038805
Consensus CDS Project CCDS29581.1
International Mouse Phenotyping Consortium Status Tmem138
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024666 Ensembl Gene Model | MGI Sequence Detail 6885 C57BL/6J ±  kb
transcript ENSMUST00000025568 Ensembl | MGI Sequence Detail 1590 Not Applicable 
polypeptide ENSMUSP00000025568 Ensembl | MGI Sequence Detail 162 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(9) UniProt(1)
Polymorphisms
SNPs within 2kb(55 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR024133 Transmembrane protein 138
Protein Ontology PR:000032245 transmembrane protein 138
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(29)
Other
accession IDs
MGI:1923914

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory