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Cyp2c65
Gene Detail
Symbol

Name
ID
Cyp2c65
cytochrome P450, family 2, subfamily c, polypeptide 65
MGI:1919553
Synonyms
2210009K14Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 19
33.70 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:39061015-39093944 bp, + strand
From VEGA annotation of GRCm38

  32930 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:133566  Vertebrate Homology Class
1 human; 2 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 3 cattle

HCOP human homology predictions: CYP2C9
Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c65

Human
homologs
CYP2C9, cytochrome P450, family 2, subfamily C, polypeptide 9
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 1559
neXtProt AC: NX_P11712

Human Synonyms: CPC9, CYP2C, CYP2C10, CYPIIC9, P450IIC9

Human Chr (Location): 10q24; chr10:94938658-94989391 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human CYP2C9

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Cyp2c65 interacts with 107 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(8)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(8) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000028349 (Evidence)
Ensembl Gene Model ENSMUSG00000067231 (Evidence)
Entrez Gene 72303 (Evidence)
UniGene 482578
NIA Mouse Gene Index U105741
Consensus CDS Project CCDS29791.1
International Mouse Phenotyping Consortium Status Cyp2c65
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028349 VEGA Gene Model | MGI Sequence Detail 32930 C57BL/6J ±  kb
transcript OTTMUST00000070270 VEGA | MGI Sequence Detail 1928 Not Applicable 
polypeptide OTTMUSP00000035781 VEGA | MGI Sequence Detail 490 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(149 from dbSNP Build 137)    SNPs within 2kb including multiple locations(151)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(21)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory