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1600014C10Rik
Gene Detail
Symbol

Name
ID
1600014C10Rik
RIKEN cDNA 1600014C10 gene
MGI:1919494
Feature Type
protein coding gene
Genetic Map
Chromosome 7
25.36 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:38183217-38197568 bp, + strand
From VEGA annotation of GRCm38

  14352 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41744  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 3 chicken; 1 western clawed frog; 3 zebrafish

Gene Tree: 1600014C10Rik

Human
homologs
Human Homolog C19orf12, chromosome 19 open reading frame 12
NCBI Gene ID 83636
neXtProt AC  NX_Q9NSK7
Human Synonyms  NBIA3, NBIA4, SPG43
Human Chr (Location)  19q12; chr19:29698886-29715789 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human C19orf12
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(4) Targeted(1)
Interactions
1600014C10Rik interacts with 263 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component endoplasmic reticulum, integral component of membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(106)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(106) cDNA(106)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000042336 (Evidence)
Ensembl Gene ModelENSMUSG00000054676 (Evidence)
Entrez Gene72244 (Evidence)
UniGene187554
DFCITC1575436, TC1588909, TC1622138, TC1735431
DoTSDT.493279, DT.101721371, DT.94354606
NIA Mouse Gene IndexU074786
International Mouse Knockout Project Status1600014C10Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042336 VEGA Gene Model | MGI Sequence Detail 14352 C57BL/6J ±  kb
transcript OTTMUST00000111538 VEGA | MGI Sequence Detail 403 Not Applicable 
polypeptide OTTMUSP00000062470 VEGA | MGI Sequence Detail 55 Not Applicable 

For the selected sequences
All sequences(52) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(390 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:2141949

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory