About   Help   FAQ
Take the Alliance for Genomic Resources User Survey
1600014C10Rik Gene Detail
Summary
  • Symbol
    1600014C10Rik
  • Name
    RIKEN cDNA 1600014C10 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919494
    NCBI Gene: 72244
Location & Maps
more
  • Sequence Map
    Chr7:38183217-38197568 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      14352 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 25.36 cM, cytoband B1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    C19orf12, chromosome 19 open reading frame 12
  • Vertebrate Orthologs
    14
  • Human Ortholog
    C19orf12, chromosome 19 open reading frame 12
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NBIA3, NBIA4, SPG43
  • Links
    NCBI Gene ID: 83636
    neXtProt AC: NX_Q9NSK7

  • Chr Location
    19q12; chr19:29698886-29715789 (-)  GRCh38.p2
Human Diseases
more
  • Diseases
    2 with human C19orf12 associations

Human Disease Mouse Models
       Neurodegeneration with Brain Iron Accumulation 4; NBIA4   OMIM: 614298
Spastic Paraplegia 43, Autosomal Recessive; SPG43   OMIM: 615043
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    4
  • Targeted
    1
  • Incidental Mutations
    CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    106
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
    55
  • RefSeq
    4
  • UniProt
    3
  • UniGene
    187554
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042336 VEGA Gene Model | MGI Sequence Detail 14352 C57BL/6J ±  kb
transcript OTTMUST00000111533 VEGA | MGI Sequence Detail 3341 Not Applicable  
polypeptide OTTMUSP00000074500 VEGA | MGI Sequence Detail 83 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    387 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR033369 Protein C19orf12 homologue
Molecular
Reagents
less
  • All nucleic 106
    cDNA 106

    Microarray probesets 5
Other
Accession IDs
less
MGI:2141949
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory