1600014C10Rik
Gene Detail

Symbol

Name
ID

1600014C10Rik
RIKEN cDNA 1600014C10 gene
MGI:1919494

Feature Type

protein coding gene

Genetic Map

Chromosome 7
25.36 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr7:38183217-38197568 bp, + strand From VEGA annotation of GRCm38   14352 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:41744  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 3 chicken; 1 western clawed frog; 3 zebrafish

Gene Tree: 1600014C10Rik

Human
homologs

Human Homolog		C19orf12, chromosome 19 open reading frame 12
NCBI Gene ID		83636
neXtProt AC		NX_Q9NSK7
Human Synonyms		NBIA3, NBIA4, SPG43
Human Chr (Location)		19q12; chr19:29698886-29715789 (-)  GRCh38
Disease Associations		(2) Diseases Associated with Human C19orf12

Mutations,
alleles, and
phenotypes

All mutations/alleles(5) : Gene trapped(4) Targeted(1)

Interactions

1600014C10Rik interacts with 263 markers (Mir7-1, Mir7-2, Mir7b, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (6 annotations)

Process	biological_process
Component	endoplasmic reticulum, integral component of membrane, ...
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)

cDNA source data(106)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(106) cDNA(106)
Microarray probesets(5)

Other database
links

VEGA Gene Model	OTTMUSG00000042336 (Evidence)
Ensembl Gene Model	ENSMUSG00000054676 (Evidence)
Entrez Gene	72244 (Evidence)
UniGene	187554
DFCI	TC1588909, TC1575436, TC1622138, TC1735431
DoTS	DT.94354606, DT.101721371, DT.493279
NIA Mouse Gene Index	U074786
International Mouse Knockout Project Status	1600014C10Rik

Sequences

Length	Strain/Species
genomic	OTTMUSG00000042336	VEGA Gene Model | MGI Sequence Detail	14352	C57BL/6J
transcript	OTTMUST00000111538	VEGA | MGI Sequence Detail	403	Not Applicable
polypeptide	OTTMUSP00000062470	VEGA | MGI Sequence Detail	55	Not Applicable

All sequences(53) RefSeq(4) UniProt(3)

Polymorphisms

SNPs within 2kb(390 from dbSNP Build 137)

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)

Other
accession IDs

MGI:2141949