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Cyp2c55
Gene Detail
 Symbol
Name
ID
Cyp2c55
cytochrome P450, family 2, subfamily c, polypeptide 55
MGI:1919332
Synonyms 2010318C06Rik
Feature Type protein coding gene
Genetic Map
Chromosome 19
33.64 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:39007019-39042693 bp, + strand
From VEGA annotation of GRCm38

  35675 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:133567  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 rhesus macaque; 1 cattle; 1 chicken

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c55

Human
homologs
Human Homolog CYP2C18, cytochrome P450, family 2, subfamily C, polypeptide 18
NCBI Gene ID 1562
neXtProt AC  NX_P33260
Human Synonyms  CPCI, CYP2C, CYP2C17, P450-6B/29C, P450IIC17
Human Chr (Location)  10q24; chr10:94683494-94736190 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2c55 interacts with 86 markers (Mir30a, Mir30c-1, Mir30c-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process arachidonic acid metabolic process, linoleic acid metabolic process, ...
Component endoplasmic reticulum, intracellular membrane-bounded organelle, ...
Function arachidonic acid epoxygenase activity, aromatase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(29)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(30) cDNA(29) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000023617 (Evidence)
Ensembl Gene ModelENSMUSG00000025002 (Evidence)
Entrez Gene72082 (Evidence)
UniGene142581
DFCITC1584037
DoTSDT.532589
NIA Mouse Gene IndexU019431
EC1.14.14.1
Consensus CDS ProjectCCDS29790.1
International Mouse Knockout Project StatusCyp2c55
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023617 VEGA Gene Model | MGI Sequence Detail 35675 C57BL/6J ±  kb
transcript OTTMUST00000057648 VEGA | MGI Sequence Detail 1995 Not Applicable 
polypeptide OTTMUSP00000027819 VEGA | MGI Sequence Detail 490 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(175 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006232 cytochrome P450 2C55
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory