About   Help   FAQ
Apol9b Gene Detail
Summary
  • Symbol
    Apol9b
  • Name
    apolipoprotein L 9b
  • Synonyms
    2310016F22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919148
    NCBI Gene: 71898
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:77729072-77736382 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 36.75 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919148
protein coding gene Chr15:77729039-77736382 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022028
protein coding gene Chr15:77860122-77862038 (+)
A/J MGP_AJ_G0021983
protein coding gene Chr15:74694931-74708202 (-)
AKR/J MGP_AKRJ_G0021964
protein coding gene Chr15:76739680-76747346 (-)
BALB/cJ MGP_BALBcJ_G0021997
protein coding gene Chr15:75174058-75181543 (+)
C3H/HeJ MGP_C3HHeJ_G0021763
protein coding gene Chr15:76818257-76820173 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022439
protein coding gene Chr15:80895387-80906695 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019960
protein coding gene Chr15:71331824-71339088 (-)
CAST/EiJ MGP_CASTEiJ_G0021282
protein coding gene Chr15:77587051-77731344 (-)
CBA/J MGP_CBAJ_G0021733
protein coding gene Chr15:83419582-83427290 (+)
DBA/2J MGP_DBA2J_G0021861
protein coding gene Chr15:74644634-74654054 (+)
FVB/NJ MGP_FVBNJ_G0021837
protein coding gene Chr15:73297448-73304868 (-)
LP/J MGP_LPJ_G0021926
protein coding gene Chr15:77629705-77640311 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0022450
protein coding gene Chr15:76989307-76991224 (-)
PWK/PhJ MGP_PWKPhJ_G0021025
protein coding gene Chr15:74405796-74407788 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0021341
protein coding gene Chr15:77634311-77642949 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    4 involving Apol9b
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 71898 NCBI Gene Model | MGI Sequence Detail 7311 C57BL/6J ±  kb
transcript NM_001168660 RefSeq | MGI Sequence Detail 1558 C57BL/6  
polypeptide NP_776104 RefSeq | MGI Sequence Detail 310 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR008405 Apolipoprotein L
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 39
    Diseases 1
    Gene Ontology 1
    Phenotypes 23
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/14/2019
MGI 6.14
The Jackson Laboratory