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Nup93 Gene Detail
Summary
  • Symbol
    Nup93
  • Name
    nucleoporin 93
  • Synonyms
    2410008G02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919055
    NCBI Gene: 71805
  • Gene Overview
    MyGene.info: NUP93
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:94214564-94317227 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 46.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    499 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919055
protein coding gene Chr8:94214564-94328100 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033958
protein coding gene Chr8:95623297-95730165 (+)
A/J MGP_AJ_G0033941
protein coding gene Chr8:91898514-91998862 (+)
AKR/J MGP_AKRJ_G0033867
protein coding gene Chr8:94420974-94520244 (+)
BALB/cJ MGP_BALBcJ_G0033933
protein coding gene Chr8:91991400-92093165 (+)
C3H/HeJ MGP_C3HHeJ_G0033643
protein coding gene Chr8:95121808-95226805 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034454
protein coding gene Chr8:99117301-99225144 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031395
protein coding gene Chr8:85704215-85814964 (+)
CAST/EiJ MGP_CASTEiJ_G0032975
protein coding gene Chr8:94713854-94823789 (+)
CBA/J MGP_CBAJ_G0033619
protein coding gene Chr8:102408382-102514490 (+)
DBA/2J MGP_DBA2J_G0033773
protein coding gene Chr8:91367222-91467946 (+)
FVB/NJ MGP_FVBNJ_G0033720
protein coding gene Chr8:90332625-90435096 (+)
LP/J MGP_LPJ_G0033865
protein coding gene Chr8:95771247-95880367 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033762
protein coding gene Chr8:104706072-104812039 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034472
protein coding gene Chr8:94578319-94681017 (+)
PWK/PhJ MGP_PWKPhJ_G0032677
protein coding gene Chr8:90731898-90845179 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032514
protein coding gene Chr8:93403045-93507183 (+)
WSB/EiJ MGP_WSBEiJ_G0033087
protein coding gene Chr8:95097395-95201388 (+)



Homology
more
  • Human Ortholog
    NUP93, nucleoporin 93
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NUP93, nucleoporin 93
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NIC96
  • Links
    NCBI Gene ID: 9688
    neXtProt AC: NX_Q8N1F7
    UniProt: Q8N1F7

  • Chr Location
    16q13; chr16:56730105-56844950 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 40971
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NUP93
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human NUP93 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032939 Ensembl Gene Model | MGI Sequence Detail 102664 C57BL/6J ±  kb
transcript ENSMUST00000079961 Ensembl | MGI Sequence Detail 2707 Not Applicable  
polypeptide ENSMUSP00000078878 Ensembl | MGI Sequence Detail 819 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:277272 Beckers A, et al., The evolutionary conserved FOXJ1 target gene Fam183b is essential for motile cilia in Xenopus but dispensable for ciliary function in mice. Sci Rep. 2018 Oct 2;8(1):14678

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory