About   Help   FAQ
Bbs10
Gene Detail
Symbol

Name
ID
Bbs10
Bardet-Biedl syndrome 10 (human)
MGI:1919019
Synonyms
1300007O09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 10
58.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:111298679-111301736 bp, + strand
From NCBI annotation of GRCm38

  3058 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49781  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: BBS10
Gene Tree: Bbs10

Human
homologs
BBS10, Bardet-Biedl syndrome 10
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 79738
neXtProt AC: NX_Q8TAM1

Human Synonyms: C12orf58

Human Chr (Location): 12q21.2; chr12:76344486-76348442 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human BBS10

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Bbs10 interacts with 123 markers (Mir1b, Mir7-1, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process chaperone-mediated protein complex assembly, nonmotile primary cilium assembly, ...
Component cell projection
Function ATP binding, nucleotide binding, ...
External Resources: FuncBase
Expression
cDNA source data(8)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase bbs10    NEW 
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000035759 (Evidence)
Entrez Gene 71769 (Evidence)
UniGene 45256
DFCI TC1697488, TC1587606, TC1714574
DoTS DT.97354905, DT.55281617
NIA Mouse Gene Index U270120
Consensus CDS Project CCDS48689.1
International Mouse Phenotyping Consortium Status Bbs10
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 71769 NCBI Gene Model | MGI Sequence Detail 3058 C57BL/6J ±  kb
transcript NM_027914 RefSeq | MGI Sequence Detail 2753 C57BL/6 
polypeptide Q9DBI2 UniProt | EBI | MGI Sequence Detail 713 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(96 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002423 Chaperonin Cpn60/TCP-1
InterPro IPR027413 GroEL-like equatorial domain
Protein Ontology PR:000004664 bardet-Biedl syndrome 10 protein
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)
Other
accession IDs
MGI:2143615

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/20/2015
MGI 5.22
The Jackson Laboratory