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5530401A14Rik Gene Detail
Summary
  • Symbol
    5530401A14Rik
  • Name
    RIKEN cDNA 5530401A14 gene
Location &
Maps
more
  • Sequence Map
    Chr11:81860677-81894582 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 49.61 cM, cytoband B5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    173 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918638
protein coding gene Chr11:81860673-81894582 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018819
protein coding gene Chr11:83097653-83131558 (+)
A/J MGP_AJ_G0018786
protein coding gene Chr11:79899009-79933326 (+)
AKR/J MGP_AKRJ_G0018756
protein coding gene Chr11:82289270-82323315 (+)
BALB/cJ MGP_BALBcJ_G0018759
protein coding gene Chr11:80297070-80330940 (+)
C3H/HeJ MGP_C3HHeJ_G0018573
protein coding gene Chr11:82345273-82382150 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019211
protein coding gene Chr11:85600180-85634935 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016845
protein coding gene Chr11:76811420-76845383 (+)
CAST/EiJ MGP_CASTEiJ_G0018128
protein coding gene Chr11:82889568-82926342 (+)
CBA/J MGP_CBAJ_G0018544
protein coding gene Chr11:89346656-89382667 (+)
DBA/2J MGP_DBA2J_G0018652
protein coding gene Chr11:79458858-79493440 (+)
FVB/NJ MGP_FVBNJ_G0018641
protein coding gene Chr11:79013276-79047556 (+)
LP/J MGP_LPJ_G0018722
protein coding gene Chr11:83622966-83658726 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018668
protein coding gene Chr11:89535444-89576552 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019251
protein coding gene Chr11:82560565-82594485 (+)
PWK/PhJ MGP_PWKPhJ_G0017898
protein coding gene Chr11:80285622-80320231 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017689
protein coding gene Chr11:82172088-82208393 (+)
WSB/EiJ MGP_WSBEiJ_G0018180
protein coding gene Chr11:82421519-82458758 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving 5530401A14Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 71388 NCBI Gene Model | MGI Sequence Detail 33906 C57BL/6J ±  kb
transcript NR_038010 RefSeq | MGI Sequence Detail 1838 C57BL/6  
polypeptide Q9D3H9 UniProt | EBI | MGI Sequence Detail 131 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory