About   Help   FAQ
5530401A14Rik Gene Detail
Summary
  • Symbol
    5530401A14Rik
  • Name
    RIKEN cDNA 5530401A14 gene
Location &
Maps
more
  • Sequence Map
    Chr11:81860677-81894582 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 49.61 cM, cytoband B5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    173 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918638
protein coding gene Chr11:81860673-81894582 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018819
protein coding gene Chr11:83097653-83131558 (+)
A/J MGP_AJ_G0018786
protein coding gene Chr11:79899009-79933326 (+)
AKR/J MGP_AKRJ_G0018756
protein coding gene Chr11:82289270-82323315 (+)
BALB/cJ MGP_BALBcJ_G0018759
protein coding gene Chr11:80297070-80330940 (+)
C3H/HeJ MGP_C3HHeJ_G0018573
protein coding gene Chr11:82345273-82382150 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019211
protein coding gene Chr11:85600180-85634935 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016845
protein coding gene Chr11:76811420-76845383 (+)
CAST/EiJ MGP_CASTEiJ_G0018128
protein coding gene Chr11:82889568-82926342 (+)
CBA/J MGP_CBAJ_G0018544
protein coding gene Chr11:89346656-89382667 (+)
DBA/2J MGP_DBA2J_G0018652
protein coding gene Chr11:79458858-79493440 (+)
FVB/NJ MGP_FVBNJ_G0018641
protein coding gene Chr11:79013276-79047556 (+)
LP/J MGP_LPJ_G0018722
protein coding gene Chr11:83622966-83658726 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018668
protein coding gene Chr11:89535444-89576552 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019251
protein coding gene Chr11:82560565-82594485 (+)
PWK/PhJ MGP_PWKPhJ_G0017898
protein coding gene Chr11:80285622-80320231 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017689
protein coding gene Chr11:82172088-82208393 (+)
WSB/EiJ MGP_WSBEiJ_G0018180
protein coding gene Chr11:82421519-82458758 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving 5530401A14Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 71388 NCBI Gene Model | MGI Sequence Detail 33906 C57BL/6J ±  kb
transcript NR_038010 RefSeq | MGI Sequence Detail 1838 C57BL/6  
polypeptide Q9D3H9 UniProt | EBI | MGI Sequence Detail 131 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory