About   Help   FAQ
Phf11a
Gene Detail
 Symbol
Name
ID
Phf11a
PHD finger protein 11A
MGI:1918441
Synonyms 4933417L10Rik, Phf11
Feature Type protein coding gene
Genetic Map
Chromosome 14
31.48 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:59276913-59297522 bp, - strand
From VEGA annotation of GRCm38

  20610 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:87807  Vertebrate Homology Class
1 human; 4 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken

Gene Tree: Phf11a

Human
homologs
Human Homolog PHF11, PHD finger protein 11
NCBI Gene ID 51131
neXtProt AC  NX_Q9UIL8
Human Synonyms  APY, BCAP, IGEL, IGER, IGHER, NYREN34, NY-REN-34
Human Chr (Location)  13q14.2; chr13:49495610-49528987 (+)  GRCh38
Disease Associations  (2) Diseases Associated with Human PHF11
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from APF )
Interactions
Phf11a interacts with 92 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component nucleus
Function metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (24)    Tissues (15)    Images (2)
Theiler Stages: 23
Assay TypeResults
RNA in situ 24
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000021013 (Evidence)
Ensembl Gene ModelENSMUSG00000044703 (Evidence)
Entrez Gene219131 (Evidence)
UniGene254918
DFCITC1590774
DoTSDT.101330877, DT.55242818
Consensus CDS ProjectCCDS27169.1
International Mouse Knockout Project StatusPhf11a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021013 VEGA Gene Model | MGI Sequence Detail 20610 C57BL/6J ±  kb
transcript OTTMUST00000049673 VEGA | MGI Sequence Detail 1354 Not Applicable 
polypeptide OTTMUSP00000023054 VEGA | MGI Sequence Detail 293 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(6) UniProt(1)
Polymorphisms SNPs within 2kb(71 from dbSNP Build 137)    SNPs within 2kb including multiple locations(87)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000034106 PHD finger protein 11A
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. http://www.gudmap.org. 2004;
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/16/2014
MGI 5.19
The Jackson Laboratory