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Phf11a Gene Detail
Summary
  • Symbol
    Phf11a
  • Name
    PHD finger protein 11A
  • Synonyms
    4933417L10Rik, Phf11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918441
    NCBI Gene: 219131
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:59514362-59534971 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 31.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918441
 protein coding gene Chr14:59514362-59534972 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0021387
 protein coding gene Chr14:52515535-52532479 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0021825
 protein coding gene Chr14:56179996-56205497 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019365
 protein coding gene Chr14:50586160-50630465 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0021253
 protein coding gene Chr14:52069459-52096979 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0021327
 protein coding gene Chr14:54545873-54614790 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021260
 protein coding gene Chr14:57190877-57211082 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PHF11, PHD finger protein 11
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PHF11, PHD finger protein 11
  • Synonyms
    APY, BCAP, IGEL, IGER, IGHER, NYREN34, NY-REN-34
  • Links
    NCBI Gene ID: 51131
    neXtProt AC: NX_Q9UIL8
    UniProt: Q9UIL8

  • Chr Location
    13q14.2; chr13:49495610-49528981 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    15
  • cDNA Data
    10
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044703 Ensembl Gene Model | MGI Sequence Detail 20610 C57BL/6J ±  kb
transcript ENSMUST00000062307 Ensembl | MGI Sequence Detail 1354 Not Applicable  
polypeptide ENSMUSP00000053146 Ensembl | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:238694 Gong Y, et al., PHF11 promotes DSB resection, ATR signaling, and HR. Genes Dev. 2017 Jan 01;31(1):46-58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory