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Lrrc56 Gene Detail
Summary
  • Symbol
    Lrrc56
  • Name
    leucine rich repeat containing 56
  • Synonyms
    5730427C23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917802
    NCBI Gene: 70552
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:141194157-141210055 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 86.48 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917802
protein coding gene Chr7:141194112-141210055 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033215
protein coding gene Chr7:146370322-146385873 (+)
A/J MGP_AJ_G0033197
protein coding gene Chr7:142184770-142200333 (+)
AKR/J MGP_AKRJ_G0033129
protein coding gene Chr7:146103422-146120609 (+)
BALB/cJ MGP_BALBcJ_G0033198
protein coding gene Chr7:141925501-141941058 (+)
C3H/HeJ MGP_C3HHeJ_G0032912
protein coding gene Chr7:145860871-145876429 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033709
protein coding gene Chr7:151722217-151738917 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030682
protein coding gene Chr7:143394669-143410295 (+)
CAST/EiJ MGP_CASTEiJ_G0032242
protein coding gene Chr7:138169505-138185477 (+)
CBA/J MGP_CBAJ_G0032884
protein coding gene Chr7:156846397-156861950 (+)
DBA/2J MGP_DBA2J_G0033036
protein coding gene Chr7:140132310-140147866 (+)
FVB/NJ MGP_FVBNJ_G0032989
protein coding gene Chr7:140045052-140061037 (+)
LP/J MGP_LPJ_G0033131
protein coding gene Chr7:147866668-147882211 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033022
protein coding gene Chr7:157513697-157529983 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033729
protein coding gene Chr7:145081896-145097450 (+)
PWK/PhJ MGP_PWKPhJ_G0031946
protein coding gene Chr7:133412428-133428569 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031793
protein coding gene Chr7:131908063-131924834 (+)
WSB/EiJ MGP_WSBEiJ_G0032353
protein coding gene Chr7:146030113-146046104 (+)



Homology
more
  • Human Ortholog
    LRRC56, leucine rich repeat containing 56
  • Vertebrate Orthologs
    7
  • Human Ortholog
    LRRC56, leucine rich repeat containing 56
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CILD39
  • Links
    NCBI Gene ID: 115399
    neXtProt AC: NX_Q8IYG6
    UniProt: Q8IYG6

  • Chr Location
    11p15.5; chr11:518967-554916 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038637 Ensembl Gene Model | MGI Sequence Detail 15899 C57BL/6J ±  kb
transcript ENSMUST00000070458 Ensembl | MGI Sequence Detail 2502 Not Applicable  
polypeptide ENSMUSP00000063912 Ensembl | MGI Sequence Detail 552 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142287
References
more
  • Summaries
    All 25
    Phenotypes 6
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory