About   Help   FAQ
Smim3
Gene Detail
 Symbol
Name
ID
Smim3
small integral membrane protein 3
MGI:1917088
Synonyms 2010002N04Rik, cI-41, Nid67
Feature Type protein coding gene
Genetic Map
Chromosome 18
34.36 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr18:60474193-60501983 bp, - strand
From Ensembl annotation of GRCm38

  27791 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13167  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Gene Tree: Smim3

Human
homologs
Human Homolog SMIM3, small integral membrane protein 3
NCBI Gene ID 85027
neXtProt AC  NX_Q9BZL3
Human Synonyms  C5orf62, MST150, NID67
Human Chr (Location)  5q33.1; chr5:150777946-150796736 (+)  GRCh38
Alleles
and
phenotypes
All alleles(17) : Gene trapped(15) Targeted(2)
Human Diseases Modeled Using Mouse Smim3 (1)    Alleles Annotated to Human Diseases(1)   
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (26)    Tissues (3)    Images (23)
Theiler Stages: 23
Assay TypeResults
RNA in situ 26
cDNA source data(27)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(27) cDNA(27)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000038059 (Evidence)
Entrez Gene106878 (Evidence)
UniGene273197
DFCITC1578914
DoTSDT.101367671, DT.530040
NIA Mouse Gene IndexU038454
Consensus CDS ProjectCCDS37831.1
International Mouse Knockout Project StatusSmim3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038059 Ensembl Gene Model | MGI Sequence Detail 27791 C57BL/6J ±  kb
transcript ENSMUST00000042710 Ensembl | MGI Sequence Detail 1984 Not Applicable 
polypeptide ENSMUSP00000039285 Ensembl | MGI Sequence Detail 60 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(6) UniProt(3)
Polymorphisms SNPs within 2kb(218 from dbSNP Build 137)
References (Earliest) J:66308 Takahashi Y, et al., Identification of cAMP analogue inducible genes in RAW264 macrophages. Biochim Biophys Acta. 2000 Jul 24;1492(2-3):385-94
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:1930796, MGI:2147200

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory