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Btbd9
Gene Detail
 Symbol
Name
ID
Btbd9
BTB (POZ) domain containing 9
MGI:1916625
Synonyms 1700023F20Rik
Feature Type protein coding gene
Genetic Map
Chromosome 17
15.62 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr17:30215524-30576287 bp, - strand
From NCBI annotation of GRCm38

  360764 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14995  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Btbd9

Human
homologs
Human Homolog BTBD9, BTB (POZ) domain containing 9
NCBI Gene ID 114781
neXtProt AC  NX_Q96Q07
Human Synonyms  dJ322I12.1
Human Chr (Location)  6p21; chr6:38168451-38640426 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(55) : Gene trapped(52) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a gene trapped allele show hyperactivity, unidirectional circling, sleep disturbances, thermal sensory alterations, increased serum iron levels, altered serotonin metabolism, enhanced long-term potentiation and paired-pulse ratios, and enhanced cued and contextual fear memory.
 
Human Diseases Modeled Using Mouse Btbd9 (1)    Alleles Annotated to Human Diseases(1)   
Interactions
Btbd9 interacts with 364 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process adult locomotory behavior, cell adhesion, ...
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (47)    Tissues (31)    Images (2)
Theiler Stages: 2, 3, 4, 5, 23, 24, 26, 28
Assay TypeResults
RNA in situ 39
RT-PCR 8
cDNA source data(104)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(106) cDNA(105) Primer pair(1)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000062202 (Evidence)
Entrez Gene224671 (Evidence)
UniGene41220
NIA Mouse Gene IndexU037638
Consensus CDS ProjectCCDS28599.1
International Mouse Knockout Project StatusBtbd9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 224671 NCBI Gene Model | MGI Sequence Detail 360764 C57BL/6J ±  kb
transcript NM_027060 RefSeq | MGI Sequence Detail 6857 Not Specified 
polypeptide Q8C726 UniProt | EBI | MGI Sequence Detail 612 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(12) UniProt(8)
Polymorphisms SNPs within 2kb(2501 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011705 BTB/Kelch-associated
InterPro IPR013069 BTB/POZ
InterPro IPR011333 BTB/POZ fold
InterPro IPR000210 BTB/POZ-like
InterPro IPR000421 Coagulation factor 5/8 C-terminal type domain
InterPro IPR008979 Galactose-binding domain-like
Protein Ontology PR:000030606 BTB/POZ domain-containing protein 9
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:187734 DeAndrade MP, et al., Enhanced hippocampal long-term potentiation and fear memory in Btbd9 mutant mice. PLoS One. 2012;7(4):e35518
All references(39)
Disease annotation references (1)
Other
accession IDs
MGI:2146876

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory