About   Help   FAQ
Cgref1 Gene Detail
Summary
  • Symbol
    Cgref1
  • Name
    cell growth regulator with EF hand domain 1
  • Synonyms
    1110004G24Rik, CGR11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915817
    NCBI Gene: 68567
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:30933143-30945480 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 16.90 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915817
protein coding gene Chr5:30933143-30945591 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029402
protein coding gene Chr5:28891858-28904842 (-)
A/J MGP_AJ_G0029368
protein coding gene Chr5:27955220-27968081 (-)
AKR/J MGP_AKRJ_G0029319
protein coding gene Chr5:29106581-29119446 (-)
BALB/cJ MGP_BALBcJ_G0029379
protein coding gene Chr5:28476385-28488566 (-)
C3H/HeJ MGP_C3HHeJ_G0029100
protein coding gene Chr5:29104639-29117925 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029832
protein coding gene Chr5:30672400-30684848 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027070
protein coding gene Chr5:25433425-25444494 (-)
CAST/EiJ MGP_CASTEiJ_G0028511
protein coding gene Chr5:28198937-28212562 (-)
CBA/J MGP_CBAJ_G0029068
protein coding gene Chr5:31243912-31255564 (-)
DBA/2J MGP_DBA2J_G0029217
protein coding gene Chr5:28137228-28148888 (-)
FVB/NJ MGP_FVBNJ_G0029175
protein coding gene Chr5:27550886-27562660 (-)
LP/J MGP_LPJ_G0029302
protein coding gene Chr5:29355724-29367407 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029204
protein coding gene Chr5:32136993-32149930 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029866
protein coding gene Chr5:28608460-28620121 (-)
PWK/PhJ MGP_PWKPhJ_G0028235
protein coding gene Chr5:27255084-27266601 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028065
protein coding gene Chr5:27980284-27992820 (-)
WSB/EiJ MGP_WSBEiJ_G0028591
protein coding gene Chr5:28671831-28684493 (-)



Homology
more
  • Human Ortholog
    CGREF1, cell growth regulator with EF-hand domain 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CGREF1, cell growth regulator with EF-hand domain 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CGR11
  • Links
    NCBI Gene ID: 10669
    neXtProt AC: NX_Q99674
    UniProt: Q99674

  • Chr Location
    2p23.3; chr2:27099353-27119127 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Cgref1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68567 NCBI Gene Model | MGI Sequence Detail 12338 C57BL/6J ±  kb
transcript NM_026770 RefSeq | MGI Sequence Detail 1350 C57BL/6  
polypeptide Q8R1U2 UniProt | EBI | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 43
    cDNA 41
    Primer pair 2

    Microarray probesets 5
Other
Accession IDs
less
MGI:2141124
References
more
  • Summaries
    All 50
    Developmental Gene Expression 6
    Diseases 1
    Gene Ontology 3
    Phenotypes 22
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:253459 Inoue SI, et al., Activated Braf induces esophageal dilation and gastric epithelial hyperplasia in mice. Hum Mol Genet. 2017 Dec 1;26(23):4715-4727

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory