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Prrc2a
Gene Detail
Symbol

Name
ID
Prrc2a
proline-rich coiled-coil 2A
MGI:1915467
Synonyms
3110039B05Rik, Bat2, Bat-2, D17H6S51E, G2, Wbp12
Feature Type
protein coding gene
Genetic Map
Chromosome 17
18.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(6)
Sequence Map
Chr17:35149076-35164897 bp, - strand
From VEGA annotation of GRCm38

  15822 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10567  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog

HCOP human homology predictions: PRRC2A
Gene Tree: Prrc2a

Human
homologs
PRRC2A, proline-rich coiled-coil 2A
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 7916
neXtProt AC: NX_P48634

Human Synonyms: BAT2, D6S51, D6S51E, G2

Human Chr (Location): 6p21.3; chr6:31620673-31637777 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(33) : Gene trapped(30) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Prrc2a interacts with 144 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process biological_process
Component cytoplasm, extracellular exosome, ...
Function poly(A) RNA binding
External Resources: FuncBase
Expression
cDNA source data(225)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase prrc2a    NEW 
Molecular
reagents
All nucleic(244) Genomic(14) cDNA(229) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000037194 (Evidence)
Ensembl Gene Model ENSMUSG00000024393 (Evidence)
Entrez Gene 53761 (Evidence)
UniGene 272462
DFCI TC1572994
DoTS DT.487862, DT.110563223, DT.94386299
NIA Mouse Gene Index U037742
Consensus CDS Project CCDS37596.1
International Mouse Phenotyping Consortium Status Prrc2a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037194 VEGA Gene Model | MGI Sequence Detail 15822 C57BL/6J ±  kb
transcript OTTMUST00000095878 VEGA | MGI Sequence Detail 6888 Not Applicable 
polypeptide OTTMUSP00000053525 VEGA | MGI Sequence Detail 2158 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(20) UniProt(6)
Polymorphisms
RFLP(6) : SNPs within 2kb(60 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009738 BAT2, N-terminal
Protein Ontology PR:000004649 large proline-rich protein BAT2
References
(Earliest) J:2355 Snoek M, et al., Fine mapping of the crossover-sites in the C4-H-2D region of H-2 recombinant mouse strains. Immunogenetics. 1991;34(6):409-12
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(47)
Other
accession IDs
MGD-MRK-1500, MGD-MRK-1507, MGD-MRK-4479, MGI:90672

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory