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Prrc2a Gene Detail
Summary
  • Symbol
    Prrc2a
  • Name
    proline-rich coiled-coil 2A
  • Synonyms
    3110039B05Rik, Bat2, Bat-2, D17H6S51E, G2, Wbp12
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915467
    NCBI Gene: 53761
  • Gene Overview
    MyGene.info: PRRC2A
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35149076-35164897 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.59 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915467
protein coding gene Chr17:35149076-35165160 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023624
protein coding gene Chr17:35292008-35309138 (-)
A/J MGP_AJ_G0023584
protein coding gene Chr17:34121774-34137212 (-)
AKR/J MGP_AKRJ_G0023552
protein coding gene Chr17:34598906-34614526 (-)
BALB/cJ MGP_BALBcJ_G0023590
protein coding gene Chr17:34261489-34277211 (-)
C3H/HeJ MGP_C3HHeJ_G0023351
protein coding gene Chr17:35000082-35016689 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024029
protein coding gene Chr17:36635612-36651305 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021510
protein coding gene Chr17:31892145-31907871 (-)
CAST/EiJ MGP_CASTEiJ_G0022847
protein coding gene Chr17:34995411-35011024 (-)
CBA/J MGP_CBAJ_G0023329
protein coding gene Chr17:38143490-38159110 (-)
DBA/2J MGP_DBA2J_G0023457
protein coding gene Chr17:33446094-33461582 (-)
FVB/NJ MGP_FVBNJ_G0023424
protein coding gene Chr17:33287352-33302958 (-)
LP/J MGP_LPJ_G0023534
protein coding gene Chr17:35620859-35636649 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023446
protein coding gene Chr17:37072597-37089466 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024074
protein coding gene Chr17:34823286-34838874 (-)
PWK/PhJ MGP_PWKPhJ_G0022595
protein coding gene Chr17:32280313-32296304 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022415
protein coding gene Chr17:32832551-32848173 (-)
WSB/EiJ MGP_WSBEiJ_G0022911
protein coding gene Chr17:34945330-34960934 (-)



Homology
more
  • Human Ortholog
    PRRC2A, proline rich coiled-coil 2A
  • Vertebrate Orthologs
    8
  • Human Ortholog
    PRRC2A, proline rich coiled-coil 2A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BAT2, D6S51, D6S51E, G2
  • Links
    NCBI Gene ID: 7916
    neXtProt AC: NX_P48634
    UniProt: P48634

  • Chr Location
    6p21.33; chr6:31620673-31637780 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024393 Ensembl Gene Model | MGI Sequence Detail 15822 C57BL/6J ±  kb
transcript ENSMUST00000025253 Ensembl | MGI Sequence Detail 6888 Not Applicable  
polypeptide ENSMUSP00000025253 Ensembl | MGI Sequence Detail 2158 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 245
    Genomic 14
    cDNA 230
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-1500, MGD-MRK-1507, MGD-MRK-4479, MGI:90672
References
more
  • Summaries
    All 43
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:2355 Snoek M, et al., Fine mapping of the crossover-sites in the C4-H-2D region of H-2 recombinant mouse strains. Immunogenetics. 1991;34(6):409-12
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory