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Prrc2a
Gene Detail
 Symbol
Name
ID
Prrc2a
proline-rich coiled-coil 2A
MGI:1915467
Synonyms 3110039B05Rik, Bat2, Bat-2, D17H6S51E, G2, Wbp12
Feature Type protein coding gene
Genetic Map
Chromosome 17
18.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(6)
Sequence Map
Chr17:35149076-35164897 bp, - strand
From VEGA annotation of GRCm38

  15822 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10567  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Prrc2a

Human
homologs
Human Homolog PRRC2A, proline-rich coiled-coil 2A
NCBI Gene ID 7916
neXtProt AC  NX_P48634
Human Synonyms  BAT2, D6S51, D6S51E, G2
Human Chr (Location)  6p21.3; chr6:31620673-31637777 (+)  GRCh38
Alleles
and
phenotypes
All alleles(33) : Gene trapped(30) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component cytoplasm, extracellular vesicular exosome, ...
Function poly(A) RNA binding
External Resources: FuncBase
Expression
cDNA source data(225)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(244) Genomic(14) cDNA(229) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000037194 (Evidence)
Ensembl Gene ModelENSMUSG00000024393 (Evidence)
Entrez Gene53761 (Evidence)
UniGene272462
DFCITC1572994
DoTSDT.110563223, DT.487862, DT.94386299
NIA Mouse Gene IndexU037742
Consensus CDS ProjectCCDS37596.1
International Mouse Knockout Project StatusPrrc2a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037194 VEGA Gene Model | MGI Sequence Detail 15822 C57BL/6J ±  kb
transcript OTTMUST00000095878 VEGA | MGI Sequence Detail 6888 Not Applicable 
polypeptide OTTMUSP00000053525 VEGA | MGI Sequence Detail 2158 Not Applicable 

For the selected sequences
All sequences(64) RefSeq(20) UniProt(6)
Polymorphisms RFLP(6) : SNPs within 2kb(60 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009738 BAT2, N-terminal
Protein Ontology PR:000004649 large proline-rich protein BAT2
References (Earliest) J:2355 Snoek M, et al., Fine mapping of the crossover-sites in the C4-H-2D region of H-2 recombinant mouse strains. Immunogenetics. 1991;34(6):409-12
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(49)
Other
accession IDs
MGD-MRK-1500, MGD-MRK-1507, MGD-MRK-4479, MGI:90672

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory