Rnaseh2c
Gene Detail

Symbol Name ID

Rnaseh2c ribonuclease H2, subunit C MGI:1915459

Synonyms

1500026D16Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 19

4.34 cM, cytoband A
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr19:5601873-5603439 bp, + strand From VEGA annotation of GRCm38   1567 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Rnaseh2c ± 2 cM)

Gene Tree: Rnaseh2c

Human ortholog

RNASEH2C ribonuclease H2, subunit C NCBI Gene ID 84153
Human Synonyms: AGS3, AYP1
Human Chr11:65485144-65488409 bp, - strand Reference GRCh37.p2 Primary Assembly
Human Diseases Associated with Human RNASEH2C (1)

Alleles and phenotypes

All alleles(8) : Targeted(2) Gene trapped(6)

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	RNA catabolic process
Component	nucleus, ribonuclease H2 complex
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (10)    Tissues (5)    Images (6)
Theiler Stages: 24, 26, 28

Assay Type	Results
RNA in situ	10

cDNA source data(64)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(65) cDNA(65)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000020425 (Evidence)
Ensembl Gene Model	ENSMUSG00000024925 (Evidence)
Entrez Gene	68209 (Evidence)
UniGene	246200
DFCI	TC1578262, TC1615329, TC1745409
NIA Mouse Gene Index	U038713
PDB	3KIO, 3P5J
Consensus CDS Project	CCDS29471.1
International Mouse Knockout Project Status	Rnaseh2c

Sequences

Length	Strain/Species
genomic	OTTMUSG00000020425	VEGA Gene Model | MGI Sequence Detail	1567	C57BL/6J
transcript	OTTMUST00000048488	VEGA | MGI Sequence Detail	1126	Not Applicable
polypeptide	OTTMUSP00000022240	VEGA | MGI Sequence Detail	166	Not Applicable

All sequences(32) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(23 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR013924	Ribonuclease H2, subunit C
Protein Ontology	PR:000014056	ribonuclease H2 subunit C

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:186180 Reijns MA, et al., Enzymatic removal of ribonucleotides from DNA is essential for mammalian genome integrity and development. Cell. 2012 May 25;149(5):1008-22
All references(32)