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Fam122a Gene Detail
Summary
  • Symbol
    Fam122a
  • Name
    family with sequence similarity 122, member A
  • Synonyms
    2410124L17Rik, 2900009I07Rik, Gm9849
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915284
    NCBI Gene: 68034
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:24476502-24477356 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 19.53 cM, cytoband C1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915284
protein coding gene Chr19:24475779-24477474 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024995
protein coding gene Chr19:22705541-22706395 (-)
A/J MGP_AJ_G0024972
protein coding gene Chr19:21456062-21456916 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0024971
protein coding gene Chr19:21514189-21515043 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0025412
protein coding gene Chr19:23422811-23423665 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022831
protein coding gene Chr19:21628396-21629256 (-)
CAST/EiJ MGP_CASTEiJ_G0024197
protein coding gene Chr19:21988425-21989279 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0024799
protein coding gene Chr19:21343695-21344549 (-)
LP/J MGP_LPJ_G0024922
protein coding gene Chr19:22660604-22661458 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024826
protein coding gene Chr19:24458986-24459840 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025467
protein coding gene Chr19:22289337-22290191 (-)
PWK/PhJ MGP_PWKPhJ_G0023945
protein coding gene Chr19:21072758-21073612 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023750
protein coding gene Chr19:21523540-21524394 (-)
WSB/EiJ MGP_WSBEiJ_G0024264
protein coding gene Chr19:22315483-22316337 (-)



Homology
more
  • Human Ortholog
    FAM122A, family with sequence similarity 122A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM122A, family with sequence similarity 122A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C9orf42
  • Links
    NCBI Gene ID: 116224
    neXtProt AC: NX_Q96E09
    UniProt: Q96E09

  • Chr Location
    9q21.11; chr9:68780006-68783879 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074922 Ensembl Gene Model | MGI Sequence Detail 855 C57BL/6J ±  kb
transcript ENSMUST00000099556 Ensembl | MGI Sequence Detail 855 Not Applicable  
polypeptide ENSMUSP00000097152 Ensembl | MGI Sequence Detail 284 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 7
Other
Accession IDs
less
MGI:1920926, MGI:3708647
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory