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Ergic1 Gene Detail
Summary
  • Symbol
    Ergic1
  • Name
    endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
  • Synonyms
    1200007D18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914708
    NCBI Gene: 67458
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:26561489-26656931 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 13.34 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1054 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914708
protein coding gene Chr17:26560762-26656934 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023403
protein coding gene Chr17:25747479-25845753 (+)
A/J MGP_AJ_G0023362
protein coding gene Chr17:24954863-25050653 (+)
AKR/J MGP_AKRJ_G0023328
protein coding gene Chr17:25083488-25180502 (+)
BALB/cJ MGP_BALBcJ_G0023367
protein coding gene Chr17:25209472-25305432 (+)
C3H/HeJ MGP_C3HHeJ_G0023127
protein coding gene Chr17:25475959-25574258 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023807
protein coding gene Chr17:26800798-26897468 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021282
protein coding gene Chr17:22411156-22508442 (+)
CAST/EiJ MGP_CASTEiJ_G0022628
protein coding gene Chr17:25406291-25505084 (+)
CBA/J MGP_CBAJ_G0023102
protein coding gene Chr17:27781688-27881233 (+)
DBA/2J MGP_DBA2J_G0023232
protein coding gene Chr17:24544023-24640220 (+)
FVB/NJ MGP_FVBNJ_G0023202
protein coding gene Chr17:24322371-24418405 (+)
LP/J MGP_LPJ_G0023309
protein coding gene Chr17:26014960-26110827 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023221
protein coding gene Chr17:27306184-27404246 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023849
protein coding gene Chr17:25432791-25531498 (+)
PWK/PhJ MGP_PWKPhJ_G0022377
protein coding gene Chr17:23338956-23436632 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022195
protein coding gene Chr17:23496626-23606092 (+)
WSB/EiJ MGP_WSBEiJ_G0022691
protein coding gene Chr17:25485889-25583904 (+)



Homology
more
  • Human Ortholog
    ERGIC1, endoplasmic reticulum-golgi intermediate compartment 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ERGIC1, endoplasmic reticulum-golgi intermediate compartment 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AMCN, ERGIC32, ERGIC-32, NET24
  • Links
    NCBI Gene ID: 57222
    neXtProt AC: NX_Q969X5
    UniProt: Q969X5

  • Chr Location
    5q35.1; chr5:172834220-172952685 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41667
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ERGIC1
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human ERGIC1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001576 Ensembl Gene Model | MGI Sequence Detail 95443 C57BL/6J ±  kb
transcript ENSMUST00000167662 Ensembl | MGI Sequence Detail 2754 Not Applicable  
polypeptide ENSMUSP00000132922 Ensembl | MGI Sequence Detail 290 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000007174 endoplasmic reticulum-Golgi intermediate compartment protein 1
  • InterPro Domains
    IPR012936 Endoplasmic reticulum vesicle transporter, C-terminal
    IPR039542 Endoplasmic reticulum vesicle transporter, N-terminal
Molecular
Reagents
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  • All nucleic 121
    cDNA 121

    Microarray probesets 6
References
more
  • Summaries
    All 37
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory