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2210010C04Rik
Gene Detail
 Symbol
Name
ID
2210010C04Rik
RIKEN cDNA 2210010C04 gene
MGI:1914623
Feature Type protein coding gene
Genetic Map
Chromosome 6
19.10 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:41030268-41035509 bp, - strand
From VEGA annotation of GRCm38

  5242 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:134055  Vertebrate Homology Class
1 mouse; 1 rat; 1 chimpanzee; 2 cattle; 1 dog; 3 chicken; 7 western clawed frog; 1 zebrafish

Protein SuperFamily: trypsin
Gene Tree: 2210010C04Rik

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
2210010C04Rik interacts with 167 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process proteolysis
Function hydrolase activity, peptidase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (12)    Tissues (2)    Images (12)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 12
cDNA source data(290)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(290) cDNA(290)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000026905 (Evidence)
Ensembl Gene ModelENSMUSG00000029882 (Evidence)
Entrez Gene67373 (Evidence)
UniGene153729
DFCITC1572227
DoTSDT.101292442, DT.110470098, DT.529878, DT.94214723, DT.94308688
NIA Mouse Gene IndexU213896
Consensus CDS ProjectCCDS20043.1
International Mouse Knockout Project Status2210010C04Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026905 VEGA Gene Model | MGI Sequence Detail 5242 C57BL/6J ±  kb
transcript OTTMUST00000066537 VEGA | MGI Sequence Detail 2142 Not Applicable 
polypeptide OTTMUSP00000033356 VEGA | MGI Sequence Detail 247 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(3) UniProt(2)
Polymorphisms SNPs within 2kb(16 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001254 Peptidase S1
InterPro IPR001314 Peptidase S1A, chymotrypsin-type
InterPro IPR018114 Peptidase S1, trypsin family, active site
InterPro IPR009003 Trypsin-like cysteine/serine peptidase domain
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)
Other
accession IDs
MGI:2141617

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory