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Aspn
Gene Detail
 Symbol
Name
ID
Aspn
asporin
MGI:1913945
Synonyms 4631401G09Rik, PLAP-1, SLRR1C
Feature Type protein coding gene
Genetic Map
Chromosome 13
25.31 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:49544443-49567557 bp, + strand
From Ensembl annotation of GRCm38

  23115 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32357  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: class I small leucine-rich proteoglycan, decorin/asporin/byglycan types
Gene Tree: Aspn

Human
homologs
Human Homolog ASPN, asporin
NCBI Gene ID 54829
neXtProt AC  NX_Q9BXN1
Human Synonyms  OS3, PLAP1, PLAP-1, SLRR1C
Human Chr (Location)  9q22; chr9:92456205-92482562 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human ASPN
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Aspn interacts with 177 markers (Mir1a-1, Mir1a-2, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process biomineral tissue development, bone mineralization, ...
Component extracellular matrix, extracellular region, ...
Function calcium ion binding, collagen binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (68)    Tissues (64)    Images (16)
Theiler Stages: 15, 17, 20, 21, 22, 23, 25, 26, 28
Assay TypeResults
RNA in situ 56
Northern blot 12
cDNA source data(34)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(34) cDNA(34)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000021388 (Evidence)
Entrez Gene66695 (Evidence)
UniGene383216
DFCITC1578719, TC1709091
DoTSDT.40147544
NIA Mouse Gene IndexU014828
Consensus CDS ProjectCCDS26503.1
International Mouse Knockout Project StatusAspn
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021388 Ensembl Gene Model | MGI Sequence Detail 23115 C57BL/6J ±  kb
transcript ENSMUST00000177948 Ensembl | MGI Sequence Detail 2329 Not Applicable 
polypeptide ENSMUSP00000136728 Ensembl | MGI Sequence Detail 373 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(122 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001611 Leucine-rich repeat
InterPro IPR000372 Leucine-rich repeat-containing N-terminal
InterPro IPR016352 Small leucine-rich proteoglycan, class I, decorin/asporin/byglycan
Protein Ontology PR:000004382 asporin
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(42)
Other
accession IDs
MGI:2145178

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory