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Smpx
Gene Detail
Symbol

Name
ID
Smpx
small muscle protein, X-linked
MGI:1913356
Synonyms
1010001C09Rik, chisel, Csl
Feature Type
protein coding gene
Genetic Map
Chromosome X
72.67 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:157698910-157752591 bp, + strand
From VEGA annotation of GRCm38

  53682 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8640  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Smpx

Human
homologs
Human Homolog SMPX, small muscle protein, X-linked
NCBI Gene ID 23676
neXtProt AC  NX_Q9UHP9
Human Synonyms  DFN6, DFNX4
Human Chr (Location)  Xp22.1; chrX:21705972-21758160 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
 
Mice homozygous for a null mutation do not exhibit defects in heart or skeletal muscle morphology or development.
 
Interactions
Smpx interacts with 83 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Component contractile fiber, costamere, ...
External Resources: FuncBase
Expression
Literature Summary: (29 records)
Data Summary: Results (256)    Tissues (120)    Images (45)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 254
RT-PCR 2
cDNA source data(45)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(48) cDNA(45) Primer pair(1) Other(2)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000019394 (Evidence)
Ensembl Gene ModelENSMUSG00000041476 (Evidence)
Entrez Gene66106 (Evidence)
UniGene140340
DFCITC1579941, TC1596183
DoTSDT.533085, DT.94398543, DT.94398544, DT.97397462
NIA Mouse Gene IndexU020356
Consensus CDS ProjectCCDS41190.1
International Mouse Knockout Project StatusSmpx
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019394 VEGA Gene Model | MGI Sequence Detail 53682 C57BL/6J ±  kb
transcript OTTMUST00000046281 VEGA | MGI Sequence Detail 1152 Not Applicable 
polypeptide OTTMUSP00000041453 VEGA | MGI Sequence Detail 85 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(7) UniProt(5)
Polymorphisms
SNPs within 2kb(266 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000015298 small muscular protein
References
(Earliest) J:69167 Patzak D, et al., Identification, mapping, and genomic structure of a novel X-chromosomal human gene (SMPX) encoding a small muscular protein. Hum Genet. 1999 Nov;105(5):506-12
(Latest) J:193048 Wu L, et al., A systematic survey of carbonic anhydrase mRNA expression during Mammalian inner ear development. Dev Dyn. 2013 Mar;242(3):269-80
All references(54)
Other
accession IDs
MGI:1927114

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory