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Rogdi
Gene Detail
 Symbol
Name
ID
Rogdi
rogdi homolog (Drosophila)
MGI:1913299
Synonyms 0610011C19Rik, Lzf
Feature Type protein coding gene
Genetic Map
Chromosome 16
2.49 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr16:5008730-5013517 bp, - strand
From Ensembl annotation of GRCm38

  4788 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11605  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Rogdi

Human
homologs
Human Homolog ROGDI, rogdi homolog (Drosophila)
NCBI Gene ID 79641
neXtProt AC  NX_Q9GZN7
Human Synonyms  KTZS
Human Chr (Location)  16p13.3; chr16:4796962-4802950 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human ROGDI
Alleles
and
phenotypes
All alleles(1) : Targeted(1)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process hemopoiesis, positive regulation of cell proliferation
Component intracellular, nucleus
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (117)    Tissues (63)    Images (33)
Theiler Stages: 2, 3, 4, 5, 10, 18, 19, 22, 23, 24, 25, 28
Assay TypeResults
RNA in situ 90
RT-PCR 27
cDNA source data(105)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(107) cDNA(105) Primer pair(2)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000022540 (Evidence)
Entrez Gene66049 (Evidence)
UniGene27792
DFCITC1576283, TC1590112
DoTSDT.494113, DT.94140849
NIA Mouse Gene IndexU036757
International Mouse Knockout Project StatusRogdi
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022540 Ensembl Gene Model | MGI Sequence Detail 4788 C57BL/6J ±  kb
transcript ENSMUST00000023191 Ensembl | MGI Sequence Detail 1421 Not Applicable 
polypeptide ENSMUSP00000023191 Ensembl | MGI Sequence Detail 309 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(8) UniProt(1)
Polymorphisms SNPs within 2kb(28 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019386 Rogdi, leucine zipper-containing protein
Protein Ontology PR:000014156 protein rogdi
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)
Other
accession IDs
MGI:2146556, MGI:2146693

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory