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Emc6
Gene Detail
Symbol

Name
ID
Emc6
ER membrane protein complex subunit 6
MGI:1913298
Synonyms
0610009E20Rik, 0610025L18Rik, Tmem93
Feature Type
protein coding gene
Genetic Map
Chromosome 11
45.25 cM, cytoband B4
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:73175519-73177037 bp, - strand
From VEGA annotation of GRCm38

  1519 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11911  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: EMC6
Gene Tree: Emc6

Human
homologs
EMC6, ER membrane protein complex subunit 6
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 83460
neXtProt AC: NX_Q9BV81

Human Synonyms: TMEM93

Human Chr (Location): 17p13.2; chr17:3668723-3669669 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(4) Targeted(5)
Genomic Mutations involving Emc6 (1)
Interactions
Emc6 interacts with 116 markers (Mir7-2, Mir7b, Mir15a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process autophagosome assembly
Component endoplasmic reticulum, ER membrane protein complex, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(98)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase emc6    NEW 
Molecular
reagents
All nucleic(98) cDNA(98)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000006119 (Evidence)
Ensembl Gene Model ENSMUSG00000047260 (Evidence)
Entrez Gene 66048 (Evidence)
UniGene 73608
DFCI TC1677840, TC1575812
DoTS DT.91433025, DT.101148428, DT.535842
NIA Mouse Gene Index U033037
Consensus CDS Project CCDS24999.1
International Mouse Phenotyping Consortium Status Emc6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006119 VEGA Gene Model | MGI Sequence Detail 1519 C57BL/6J ±  kb
transcript OTTMUST00000013834 VEGA | MGI Sequence Detail 1332 Not Applicable 
polypeptide OTTMUSP00000006414 VEGA | MGI Sequence Detail 110 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(29 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008504 Transmembrane protein 93
Protein Ontology PR:000031400 ER membrane protein complex subunit 6
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:1917591

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory