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Tnfrsf13b Gene Detail
Summary
  • Symbol
    Tnfrsf13b
  • Name
    tumor necrosis factor receptor superfamily, member 13b
  • Synonyms
    1200009E08Rik, Taci
  • Feature Type
    protein coding gene
  • IDs
    MGI:1889411
    NCBI Gene: 57916
  • Gene Overview
    MyGene.info: TNFRSF13B
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:61126755-61149372 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 37.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    167 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1889411
protein coding gene Chr11:61126741-61149373 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018432
protein coding gene Chr11:61070707-61097078 (+)
A/J MGP_AJ_G0018401
protein coding gene Chr11:58818602-58841212 (+)
AKR/J MGP_AKRJ_G0018371
protein coding gene Chr11:60658924-60681504 (+)
BALB/cJ MGP_BALBcJ_G0018372
protein coding gene Chr11:59121200-59143923 (+)
C3H/HeJ MGP_C3HHeJ_G0018185
protein coding gene Chr11:60631496-60657874 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018824
protein coding gene Chr11:63008679-63033295 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016470
protein coding gene Chr11:55956968-55978782 (+)
CAST/EiJ MGP_CASTEiJ_G0017742
protein coding gene Chr11:60738073-60762916 (+)
CBA/J MGP_CBAJ_G0018159
protein coding gene Chr11:65748929-65773176 (+)
DBA/2J MGP_DBA2J_G0018268
protein coding gene Chr11:58400318-58422730 (+)
FVB/NJ MGP_FVBNJ_G0018259
protein coding gene Chr11:58078295-58098930 (+)
LP/J MGP_LPJ_G0018341
protein coding gene Chr11:61648089-61674217 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018283
protein coding gene Chr11:66776831-66800295 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018865
protein coding gene Chr11:60785304-60809855 (+)
PWK/PhJ MGP_PWKPhJ_G0017515
protein coding gene Chr11:58996126-59020065 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017305
protein coding gene Chr11:60598454-60623337 (+)
WSB/EiJ MGP_WSBEiJ_G0017794
protein coding gene Chr11:60395974-60421618 (+)



Homology
more
  • Human Ortholog
    TNFRSF13B, TNF receptor superfamily member 13B
  • Vertebrate Orthologs
    6
  • Human Ortholog
    TNFRSF13B, TNF receptor superfamily member 13B
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CD267, CVID, CVID2, IGAD2, RYZN, TACI, TNFRSF14B
  • Links
    NCBI Gene ID: 23495
    neXtProt AC: NX_O14836
    UniProt: O14836

  • Chr Location
    17p11.2; chr17:16939084-16972088 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with Tnfrsf13b mouse models; 2 with human TNFRSF13B associations

Human Disease Mouse Models
      
IDs
View 1 model
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    38 phenotypes from 3 alleles in 4 genetic backgrounds
    1 phenotype from multigenic genotypes
    45 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Nullizygous mice show increased B cell numbers and splenomegaly. Homozygotes for a null allele show impaired T cell-independent immune responses and isotype switching. Homozygotes for another null allele develop lymphoproliferation and fatal autoimmune nephritis with high titers of autoantibodies.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000010142 Ensembl Gene Model | MGI Sequence Detail 22618 C57BL/6J ±  kb
    transcript ENSMUST00000101103 Ensembl | MGI Sequence Detail 750 Not Applicable  
    polypeptide ENSMUSP00000098662 Ensembl | MGI Sequence Detail 249 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 41
      cDNA 41

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1918966
    References
    more
    • Summaries
      All 84
      Developmental Gene Expression 2
      Diseases 3
      Gene Ontology 7
      Phenotypes 45
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:264035 Liu L, et al., TACI-Deficient Macrophages Protect Mice Against Metaflammation and Obesity-Induced Dysregulation of Glucose Homeostasis. Diabetes. 2018 Aug;67(8):1589-1603

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory