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Rab11a
Gene Detail
Symbol

Name
ID
Rab11a
RAB11A, member RAS oncogene family
MGI:1858202
Feature Type
protein coding gene
Genetic Map
Chromosome 9
34.87 cM, cytoband C
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:64715299-64737758 bp, - strand
From VEGA annotation of GRCm38

  22460 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37903  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RAB11A
Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab11a

Human
homologs
RAB11A, RAB11A, member RAS oncogene family
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 8766
neXtProt AC: NX_P62491

Human Synonyms: YL8

Human Chr (Location): 15q22.31; chr15:65869459-65891991 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(6) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rab11a interacts with 278 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (63 annotations)
Process astral microtubule organization, cell cycle, ...
Component axon, cell, ...
Function GTPase activity, GTP binding, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (1)    Tissues (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(136)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab11a ; ZFIN rab11a    NEW 
Molecular
reagents
All nucleic(137) Genomic(1) cDNA(136)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000036848 (Evidence)
Ensembl Gene Model ENSMUSG00000004771 (Evidence)
Entrez Gene 53869 (Evidence)
UniGene 1387
DFCI TC1574238, TC1600915
DoTS DT.494963, DT.91288225
NIA Mouse Gene Index U331812
Consensus CDS Project CCDS23282.1
International Mouse Phenotyping Consortium Status Rab11a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036848 VEGA Gene Model | MGI Sequence Detail 22460 C57BL/6J ±  kb
transcript OTTMUST00000094624 VEGA | MGI Sequence Detail 2336 Not Applicable 
polypeptide OTTMUSP00000052667 VEGA | MGI Sequence Detail 216 Not Applicable 

For the selected sequences
All sequences(66) RefSeq(2) UniProt(8)
Polymorphisms
SNPs within 2kb(62 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013579 ras-related protein Rab-11A
References
(Earliest) J:61077 Bhartur SG, et al., Genomic structure of murine Rab11 family members. Biochem Biophys Res Commun. 2000 Mar 16;269(2):611-7
(Latest) J:222962 Elias S, et al., Huntingtin Is Required for Epithelial Polarity through RAB11A-Mediated Apical Trafficking of PAR3-aPKC. PLoS Biol. 2015 May;13(5):e1002142
All references(59)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory