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Csnk1d Gene Detail
Summary
  • Symbol
    Csnk1d
  • Name
    casein kinase 1, delta
  • Synonyms
    1200006A05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1355272
    NCBI Gene: 104318
  • Gene Overview
    MyGene.info: CSNK1D
Location & Maps
more
  • Sequence Map
    Chr11:120961749-120991330 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      29582 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    CSNK1D, casein kinase 1 delta
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CSNK1D, casein kinase 1 delta
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ASPS, CKIdelta, FASPS2, HCKID
  • Links
    NCBI Gene ID: 1453
    neXtProt AC: NX_P48730

  • Chr Location
    17q25; chr17:82239725-82273742 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with Csnk1d mouse models; 1 with human CSNK1D associations

Human Disease Mouse Models
       Attention Deficit-Hyperactivity Disorder; ADHD   OMIM: 143465 View 1 model
       Advanced Sleep Phase Syndrome, Familial, 2; FASPS2   OMIM: 615224 View 2 models
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    3 with disease annotations
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    15 phenotypes from 3 alleles in 3 genetic backgrounds
    2 phenotypes from multigenic genotypes
    16 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryogenesis
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
tumorigenesis
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    17
  • Gene trapped
    9
  • Targeted
    3
  • Transgenic
    5
Homozygous null mice die 1.5 to 5 days after birth and fetal weight is significantly smaller than controls.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004159 VEGA Gene Model | MGI Sequence Detail 29582 C57BL/6J ±  kb
transcript OTTMUST00000009420 VEGA | MGI Sequence Detail 3675 Not Applicable  
polypeptide OTTMUSP00000004584 VEGA | MGI Sequence Detail 415 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    121 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
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  • All nucleic 332
    cDNA 330
    Primer pair 1
    Other 1

    Microarray probesets 8
Other
Accession IDs
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MGI:1918958, MGI:2143993
References
more
  • Summaries
    All 57
    Developmental Gene Expression 7
    Diseases 4
    Gene Ontology 11
    Phenotypes 16
  • Earliest
    J:54434 Leimeister C, et al., Screen for genes regulated during early kidney morphogenesis. Dev Genet. 1999;24(3-4):273-83
  • Latest
    J:228160 Penas C, et al., Casein kinase 1delta is an APC/C(Cdh1) substrate that regulates cerebellar granule cell neurogenesis. Cell Rep. 2015 Apr 14;11(2):249-60

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/26/2016
MGI 6.03
The Jackson Laboratory