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Csnk1d
Gene Detail
 Symbol
Name
ID
Csnk1d
casein kinase 1, delta
MGI:1355272
Synonyms 1200006A05Rik
Feature Type protein coding gene
Genetic Map
Chromosome 11
84.75 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr11:120961749-120991330 bp, - strand
From VEGA annotation of GRCm38

  29582 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:74841  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: kinase-related transforming protein
Gene Tree: Csnk1d

Human
homologs
Human Homolog CSNK1D, casein kinase 1, delta
NCBI Gene ID 1453
neXtProt AC  NX_P48730
Human Synonyms  ASPS, CKIdelta, FASPS2, HCKID
Human Chr (Location)  17q25; chr17:82239669-82273718 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human CSNK1D
Alleles
and
phenotypes
All alleles(12) : Gene trapped(9) Targeted(3)
 
Homozygous null mice die 1.5 to 5 days after birth and fetal weight is significantly smaller than controls.
 
Gene Ontology
(GO)
classifications
All GO classifications: (36 annotations)
Process circadian regulation of gene expression, phosphorylation, ...
Component centrosome, cytoplasm, ...
Function ATP binding, glycoprotein binding, ...
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (102)    Tissues (69)    Images (19)
Theiler Stages: 17, 19, 20, 23, 28
Assay TypeResults
RNA in situ 95
Western blot 7
cDNA source data(327)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(332) cDNA(330) Primer pair(1) Other(1)
Microarray probesets(8)
Other database
links
VEGA Gene ModelOTTMUSG00000004159 (Evidence)
Ensembl Gene ModelENSMUSG00000025162 (Evidence)
Entrez Gene104318 (Evidence)
UniGene216227
DFCITC1573994, TC1585327, TC1597911
NIA Mouse Gene IndexU033739
EC2.7.11.1, 2.7.11.26
PDB4JJR
Consensus CDS ProjectCCDS25762.1, CCDS25763.1
International Mouse Knockout Project StatusCsnk1d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004159 VEGA Gene Model | MGI Sequence Detail 29582 C57BL/6J ±  kb
transcript OTTMUST00000009420 VEGA | MGI Sequence Detail 3675 Not Applicable 
polypeptide OTTMUSP00000004584 VEGA | MGI Sequence Detail 415 Not Applicable 

For the selected sequences
All sequences(87) RefSeq(4) UniProt(5)
Polymorphisms SNPs within 2kb(122 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
Protein Ontology PR:000005945 casein kinase I isoform delta
References (Earliest) J:54434 Leimeister C, et al., Screen for genes regulated during early kidney morphogenesis. Dev Genet. 1999;24(3-4):273-83
(Latest) J:203719 Umemura Y, et al., An in vitro ES cell-based clock recapitulation assay model identifies CK2alpha as an endogenous clock regulator. PLoS One. 2013;8(6):e67241
All references(55)
Other
accession IDs
MGI:1918958, MGI:2143993

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory