Csnk1d
Gene Detail

Symbol Name ID

Csnk1d casein kinase 1, delta MGI:1355272

Synonyms

1200006A05Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 11

84.75 cM, cytoband E2
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr11:120961749-120991330 bp, - strand From VEGA annotation of GRCm38   29582 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:74841  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: kinase-related transforming protein
Gene Tree: Csnk1d

Human homologs

Human Homolog		CSNK1D, casein kinase 1, delta
NCBI Gene ID		1453
neXtProt AC		NX_P48730
Human Synonyms		ASPS, CKIdelta, FASPS2, HCKID
Human Chr (Location)		17q25; chr17:80200537-80231594 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(12) : Targeted(3) Gene trapped(9)
 

Homozygous null mice die 1.5 to 5 days after birth and fetal weight is significantly smaller than controls.

 

Gene Ontology (GO) classifications

All GO classifications: (36 annotations)

Process	circadian regulation of gene expression, phosphorylation, ...
Component	centrosome, cytoplasm, ...
Function	ATP binding, glycoprotein binding, ...

External Resources: FuncBase

Expression

Literature Summary: (7 records)
Data Summary: Results (102)    Tissues (69)    Images (19)
Theiler Stages: 17, 19, 20, 23, 28

Assay Type	Results
RNA in situ	95
Western blot	7

cDNA source data(328)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(333) cDNA(331) Primer pair(1) Other(1)
Microarray probesets(8)

Other database links

VEGA Gene Model	OTTMUSG00000004159 (Evidence)
Ensembl Gene Model	ENSMUSG00000025162 (Evidence)
Entrez Gene	104318 (Evidence)
UniGene	216227
DFCI	TC1573994, TC1585327, TC1597911
NIA Mouse Gene Index	U033739
EC	2.7.11.1, 2.7.11.26
Consensus CDS Project	CCDS25762.1, CCDS25763.1
International Mouse Knockout Project Status	Csnk1d

Sequences

Length	Strain/Species
genomic	OTTMUSG00000004159	VEGA Gene Model | MGI Sequence Detail	29582	C57BL/6J
transcript	OTTMUST00000009420	VEGA | MGI Sequence Detail	3675	Not Applicable
polypeptide	OTTMUSP00000004584	VEGA | MGI Sequence Detail	415	Not Applicable

All sequences(87) RefSeq(4) UniProt(5)

Polymorphisms

SNPs(47 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR017441	Protein kinase, ATP binding site
InterPro	IPR000719	Protein kinase, catalytic domain
InterPro	IPR011009	Protein kinase-like domain
InterPro	IPR008271	Serine/threonine-protein kinase, active site
Protein Ontology	PR:000005945	casein kinase I isoform delta

References

(Earliest) J:54434 Leimeister C, et al., Screen for genes regulated during early kidney morphogenesis. Dev Genet. 1999;24(3-4):273-83
(Latest) J:177139 Lee HM, et al., The period of the circadian oscillator is primarily determined by the balance between casein kinase 1 and protein phosphatase 1. Proc Natl Acad Sci U S A. 2011 Sep 27;108(39):16451-6
All references(54)

Other accession IDs

MGI:1918958, MGI:2143993