Scd3
Gene Detail

Symbol Name ID

Scd3 stearoyl-coenzyme A desaturase 3 MGI:1353437

Synonyms

4930513N16Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 19

37.98 cM, cytoband D2
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr19:44203288-44244016 bp, + strand From NCBI annotation of GRCm38   40729 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:56437  Vertebrate Homology Class
1 mouse

Protein SuperFamily: acyl-CoA desaturase
Gene Tree: Scd3

Alleles and phenotypes

All alleles(6) : Gene trapped(6)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	fatty acid biosynthetic process, oxidation-reduction process
Component	integral to membrane
Function	oxidoreductase activity

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (473)    Tissues (154)    Images (24)
Theiler Stages: 22, 23

Assay Type	Results
RNA in situ	473

cDNA source data(22)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(22) cDNA(22)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000025202 (Evidence)
Entrez Gene	30049 (Evidence)
UniGene	480594
DFCI	TC1584906
DoTS	DT.55154626, DT.87073710
NIA Mouse Gene Index	U019486
Consensus CDS Project	CCDS29847.1
International Mouse Knockout Project Status	Scd3

Sequences

Length	Strain/Species
genomic	30049	NCBI Gene Model | MGI Sequence Detail	40729	C57BL/6J
transcript	NM_024450	RefSeq | MGI Sequence Detail	3470	Not Specified
polypeptide	NP_077770	RefSeq | MGI Sequence Detail	359	Not Specified

All sequences(24) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(155 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR005804	Fatty acid desaturase, type 1
InterPro	IPR015876	Fatty acid desaturase, type 1, core
InterPro	IPR001522	Fatty acid desaturase, type 1, C-terminal

References

(Earliest) J:59876 Parimoo S, et al., Identification of a novel SCD gene and expression of the SCD gene family in mouse skin. J Investig Dermatol Symp Proc. 1999 Dec;4(3):320-2
(Latest) J:175386 Maier H, et al., Normal fur development and sebum production depends on fatty acid 2-hydroxylase expression in sebaceous glands. J Biol Chem. 2011 Jul 22;286(29):25922-34
All references(27)

Other accession IDs

MGI:1922315