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Parp1 Gene Detail
Summary
  • Symbol
    Parp1
  • Name
    poly (ADP-ribose) polymerase family, member 1
  • Synonyms
    5830444G22Rik, Adprp, Adprt1, PARP, parp-1, sPARP-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1340806
    NCBI Gene: 11545
  • Gene Overview
    MyGene.info: PARP1
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:180568975-180601254 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 84.44 cM, cytoband H5
  • Mapping Data
    20 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1340806
protein coding gene Chr1:180568924-180601254 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016870
protein coding gene Chr1:187003678-187035955 (+)
A/J MGP_AJ_G0016849
protein coding gene Chr1:179447179-179479946 (+)
AKR/J MGP_AKRJ_G0016815
protein coding gene Chr1:184785497-184819751 (+)
BALB/cJ MGP_BALBcJ_G0016807
protein coding gene Chr1:180072357-180108494 (+)
C3H/HeJ MGP_C3HHeJ_G0016632
protein coding gene Chr1:185547543-185580167 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017270
protein coding gene Chr1:193023717-193062584 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014978
protein coding gene Chr1:170437183-170469711 (+)
CAST/EiJ MGP_CASTEiJ_G0016213
protein coding gene Chr1:184890529-184921655 (+)
CBA/J MGP_CBAJ_G0016606
protein coding gene Chr1:200212850-200244879 (+)
DBA/2J MGP_DBA2J_G0016712
protein coding gene Chr1:178289275-178322149 (+)
FVB/NJ MGP_FVBNJ_G0016708
protein coding gene Chr1:176381401-176413670 (+)
LP/J MGP_LPJ_G0016786
protein coding gene Chr1:188267946-188302205 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016739
protein coding gene Chr1:207388598-207422445 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017307
protein coding gene Chr1:184558303-184593002 (+)
PWK/PhJ MGP_PWKPhJ_G0016001
protein coding gene Chr1:177378684-177411311 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015777
protein coding gene Chr1:183496851-183533400 (+)
WSB/EiJ MGP_WSBEiJ_G0016276
protein coding gene Chr1:184762378-184796193 (+)



Homology
more
  • Human Ortholog
    PARP1, poly(ADP-ribose) polymerase 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PARP1, poly(ADP-ribose) polymerase 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ADPRT, ADPRT1, ADPRT 1, ARTD1, pADPRT-1, PARP, PARP-1, PPOL
  • Links
    NCBI Gene ID: 142
    neXtProt AC: NX_P09874
    UniProt: P09874

  • Chr Location
    1q42.12; chr1:226360691-226408100 (-)  GRCh38.p7

Human Diseases
less
  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    37 phenotypes from 5 alleles in 7 genetic backgrounds
    15 phenotypes from multigenic genotypes
    173 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous ablation of this gene may lead to skin hyperplasia, extreme sensitivity to radiation and alkylating agents, abnormal response to xenobiotics and endogenous compounds, reduced noise-induced hearing loss, altered susceptibility to neurotoxicity,or protection against renal ischemic injury.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 11545 NCBI Gene Model | MGI Sequence Detail 32280 C57BL/6J ±  kb
    transcript NM_007415 RefSeq | MGI Sequence Detail 3656 C57BL/6  
    polypeptide P11103 UniProt | EBI | MGI Sequence Detail 1013 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 385
      Genomic 4
      cDNA 378
      Primer pair 3

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-1132, MGI:2138374, MGI:2138692, MGI:87933
    References
    more
    • Summaries
      All 371
      Developmental Gene Expression 44
      Diseases 1
      Gene Ontology 29
      Phenotypes 173
    • Earliest
      J:9813 Huppi K, et al., Sequence and organization of the mouse poly (ADP-ribose) polymerase gene. Nucleic Acids Res. 1989 May 11;17(9):3387-401
    • Latest
      J:266268 Kowalchuk AM, et al., Requirements for Neurogenin2 during mouse postnatal retinal neurogenesis. Dev Biol. 2018 Oct 15;442(2):220-235

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    11/13/2018
    MGI 6.13
    The Jackson Laboratory