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Cyp2c38
Gene Detail
 Symbol
Name
ID
Cyp2c38
cytochrome P450, family 2, subfamily c, polypeptide 38
MGI:1306819
Feature Type protein coding gene
Genetic Map
Chromosome 19
34.03 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:39389556-39463075 bp, - strand
From VEGA annotation of GRCm38

  73520 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:117948  Vertebrate Homology Class
1 human; 3 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c38

Human
homologs
Human Homolog CYP2C8, cytochrome P450, family 2, subfamily C, polypeptide 8
NCBI Gene ID 1558
neXtProt AC  NX_P10632
Human Synonyms  CPC8, CYPIIC8, MP-12/MP-20
Human Chr (Location)  10q23.33; chr10:95036772-95069497 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human CYP2C8
Alleles
and
phenotypes
All alleles(1) : Gene trapped(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process oxidation-reduction process
Component endoplasmic reticulum, intracellular membrane-bounded organelle, ...
Function aromatase activity, caffeine oxidase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(7)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(9) cDNA(7) Primer pair(1) Other(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000028396 (Evidence)
Ensembl Gene ModelENSMUSG00000032808 (Evidence)
Entrez Gene13097 (Evidence)
UniGene42100
DFCITC1590601
DoTSDT.91336067
NIA Mouse Gene IndexU143916
EC1.14.14.1
Consensus CDS ProjectCCDS29794.1
International Mouse Knockout Project StatusCyp2c38
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028396 VEGA Gene Model | MGI Sequence Detail 73520 C57BL/6J ±  kb
transcript OTTMUST00000070360 VEGA | MGI Sequence Detail 2869 Not Applicable 
polypeptide OTTMUSP00000035844 VEGA | MGI Sequence Detail 490 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(6) UniProt(2)
Polymorphisms SNPs within 2kb(770 from dbSNP Build 137)    SNPs within 2kb including multiple locations(776)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006227 cytochrome P450 2C38
References (Earliest) J:49570 Luo G, et al., Cloning and expression of murine CYP2Cs and their ability to metabolize arachidonic acid. Arch Biochem Biophys. 1998 Sep 1;357(1):45-57
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory