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Cyp2c40
Gene Detail
 Symbol
Name
ID
Cyp2c40
cytochrome P450, family 2, subfamily c, polypeptide 40
MGI:1306815
Feature Type protein coding gene
Genetic Map
Chromosome 19
34.24 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr19:39767071-39812814 bp, - strand
From VEGA annotation of GRCm38

  45744 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:74936  Vertebrate Homology Class
4 mouse

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2c40

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2c40 interacts with 182 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process oxidation-reduction process
Component endoplasmic reticulum, intracellular membrane-bounded organelle, ...
Function aromatase activity, heme binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (12)    Tissues (12)   
Theiler Stages: 10, 18, 23, 25, 28
Assay TypeResults
RT-PCR 12
cDNA source data(31)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(32) cDNA(31) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000028294 (Evidence)
Ensembl Gene ModelENSMUSG00000025004 (Evidence)
Entrez Gene13099 (Evidence)
UniGene353875
EC1.14.14.1
Consensus CDS ProjectCCDS29798.2
International Mouse Knockout Project StatusCyp2c40
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028294 VEGA Gene Model | MGI Sequence Detail 45744 C57BL/6J ±  kb
transcript OTTMUST00000070108 VEGA | MGI Sequence Detail 1803 Not Applicable 
polypeptide OTTMUSP00000035692 VEGA | MGI Sequence Detail 520 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(4)
Polymorphisms SNPs within 2kb(278 from dbSNP Build 137)    SNPs within 2kb including multiple locations(438)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006229 cytochrome P450 2C40
References (Earliest) J:49570 Luo G, et al., Cloning and expression of murine CYP2Cs and their ability to metabolize arachidonic acid. Arch Biochem Biophys. 1998 Sep 1;357(1):45-57
(Latest) J:141632 Kasai F, et al., Emergence of complex rearrangements at translocation breakpoints in a transgenic mouse; implications for mechanisms involved in the formation of chromosome rearrangements. Cytogenet Genome Res. 2007;119(1-2):83-90
All references(21)
Other
accession IDs
MGI:2147496, MGI:2147589

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory