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Cyp2c40 Gene Detail
Summary
  • Symbol
    Cyp2c40
  • Name
    cytochrome P450, family 2, subfamily c, polypeptide 40
  • Feature Type
    protein coding gene
  • IDs
    MGI:1306815
    NCBI Gene: 13099
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr19:39767073-39812814 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 34.24 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    190 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1306815
protein coding gene Chr19:39767071-39812814 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025106
protein coding gene Chr19:38717233-38885462 (-)
A/J MGP_AJ_G0025081
protein coding gene Chr19:36986607-37030541 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0025077
protein coding gene Chr19:36977461-36991629 (-)
C3H/HeJ MGP_C3HHeJ_G0024836
protein coding gene Chr19:38178691-38392539 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025518
protein coding gene Chr19:39860003-40085820 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0024946
protein coding gene Chr19:36811547-36975659 (-)
FVB/NJ MGP_FVBNJ_G0024909
protein coding gene Chr19:36674509-36722763 (-)
LP/J MGP_LPJ_G0025032
protein coding gene Chr19:38769259-39092346 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024938
protein coding gene Chr19:41386991-41742121 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0023854
protein coding gene Chr19:37143205-37150135 (-)
WSB/EiJ MGP_WSBEiJ_G0024369
protein coding gene Chr19:38281886-38324824 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 13099 NCBI Gene Model | MGI Sequence Detail 45742 C57BL/6J ±  kb
transcript NM_010004 RefSeq | MGI Sequence Detail 1801 C57BL/6  
polypeptide P56657 UniProt | EBI | MGI Sequence Detail 491 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 32
    cDNA 31
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2147496, MGI:2147589
References
more
  • Summaries
    All 22
    Developmental Gene Expression 2
    Gene Ontology 4
  • Earliest
    J:49570 Luo G, et al., Cloning and expression of murine CYP2Cs and their ability to metabolize arachidonic acid. Arch Biochem Biophys. 1998 Sep 1;357(1):45-57
  • Latest
    J:256166 Creasy KT, et al., Zinc Fingers and Homeoboxes 2 (Zhx2) Regulates Sexually Dimorphic Cyp Gene Expression in the Adult Mouse Liver. Gene Expr. 2016;17(1):7-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory