About   Help   FAQ
Tbx15
Gene Detail
Symbol

Name
ID
Tbx15
T-box 15
MGI:1277234
Synonyms
de, Tbx14, Tbx8
Feature Type
protein coding gene
Genetic Map
Chromosome 3
43.03 cM
Detailed Genetic Map ± 1 cM


Mapping data(10)
Sequence Map
Chr3:99240381-99354259 bp, + strand
From VEGA annotation of GRCm38

  113879 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7967  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TBX15
Gene Tree: Tbx15

Human
homologs
TBX15, T-box 15
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 6913
neXtProt AC: NX_Q96SF7

Human Synonyms: TBX14

Human Chr (Location): 1p11.1; chr1:118883043-118989556 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TBX15

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Spontaneous(2) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutants have low set ears that project laterally, skeletal abnormalities and distinctive dorsoventral coat color patterning.
 
Phenotype Images(2)
Interactions
Tbx15 interacts with 299 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (17 annotations)
Process embryonic cranial skeleton morphogenesis, embryonic skeletal system morphogenesis, ...
Component nucleus, Tle3-Aes complex
Function DNA binding, protein heterodimerization activity, ...
External Resources: FuncBase
Expression
Literature Summary: (19 records)
Data Summary: Results (208)    Tissues (106)    Images (56)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 178
In situ reporter (knock in) 18
Northern blot 4
RT-PCR 8
cDNA source data(22)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: GEISHA TBX15 ; Xenbase tbx15 ; ZFIN tbx15    NEW 
Molecular
reagents
All nucleic(25) Genomic(1) cDNA(22) Primer pair(1) Other(1)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000006867 (Evidence)
Ensembl Gene Model ENSMUSG00000027868 (Evidence)
Entrez Gene 21384 (Evidence)
UniGene 88761
DFCI TC1583965
DoTS DT.111061302, DT.50315684, DT.111061293, DT.101159654
NIA Mouse Gene Index U003629
Consensus CDS Project CCDS17673.1
International Mouse Phenotyping Consortium Status Tbx15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006867 VEGA Gene Model | MGI Sequence Detail 113879 C57BL/6J ±  kb
transcript OTTMUST00000015869 VEGA | MGI Sequence Detail 3566 Not Applicable 
polypeptide OTTMUSP00000007288 VEGA | MGI Sequence Detail 602 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(6) UniProt(1)
Polymorphisms
RFLP(1) : SNPs within 2kb(845 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008967 p53-like transcription factor, DNA-binding
InterPro IPR001699 Transcription factor, T-box
InterPro IPR018186 Transcription factor, T-box, conserved site
Protein Ontology PR:000016145 T-box transcription factor TBX15
References
(Earliest) J:65329 Falconer DS, de - droopy ear. Mouse News Lett. 1955;12:20
(Latest) J:209112 Shimizu H, et al., The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. PLoS One. 2013;8(10):e75754
All references(53)
Other
accession IDs
MGD-MRK-8821, MGI:1201668, MGI:94879

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/23/2015
MGI 5.22
The Jackson Laboratory