Zfp106
Gene Detail

Symbol

Name
ID

Zfp106
zinc finger protein 106
MGI:1270153

Synonyms

Cd-1, H3a, Sh3bp3, sirm

Feature Type

protein coding gene

Genetic Map

Chromosome 2
60.37 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(8)

Sequence Map

Chr2:120506820-120563843 bp, - strand From VEGA annotation of GRCm38   57024 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:40787  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Gene Tree: Zfp106

Human
homologs

Human Homolog		ZNF106, zinc finger protein 106
NCBI Gene ID		64397
neXtProt AC		NX_Q9H2Y7
Human Synonyms		SH3BP3, ZFP106, ZNF474
Human Chr (Location)		15q15.1; chr15:42412437-42491197 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(97) : Gene trapped(95) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Zfp106 interacts with 387 markers (Mir7-1, Mir7-2, Mir7b, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (10 annotations)

Process	insulin receptor signaling pathway
Component	cytoplasm, cytosol, ...
Function	metal ion binding, opioid peptide activity, ...

External Resources: FuncBase

Expression

Literature Summary: (4 records)

Data Summary: Results (94)    Tissues (46)    Images (30)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	63
Northern blot	24
Western blot	7

cDNA source data(24)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(34) Genomic(4) cDNA(25) Primer pair(5)
Microarray probesets(9)

Other database
links

VEGA Gene Model	OTTMUSG00000015618 (Evidence)
Ensembl Gene Model	ENSMUSG00000027288 (Evidence)
Entrez Gene	20402 (Evidence)
DFCI	TC1596646, TC1622493, TC1575920, TC1588246, TC1625170, TC1631922
NIA Mouse Gene Index	U023247
Consensus CDS Project	CCDS16621.1
International Mouse Knockout Project Status	Zfp106

Sequences

Length	Strain/Species
genomic	OTTMUSG00000015618	VEGA Gene Model | MGI Sequence Detail	57024	C57BL/6J
transcript	OTTMUST00000037093	VEGA | MGI Sequence Detail	9085	Not Applicable
polypeptide	OTTMUSP00000016632	VEGA | MGI Sequence Detail	1888	Not Applicable

All sequences(101) RefSeq(15) UniProt(17)

Polymorphisms

PCR(2) : SNPs within 2kb(436 from dbSNP Build 137)    SNPs within 2kb including multiple locations(442)

Protein-related
information

Resource	ID	Description
InterPro	IPR018391	Pyrrolo-quinoline quinone beta-propeller repeat
InterPro	IPR001680	WD40 repeat
InterPro	IPR017986	WD40-repeat-containing domain
InterPro	IPR015943	WD40/YVTN repeat-like-containing domain
InterPro	IPR007087	Zinc finger, C2H2
InterPro	IPR015880	Zinc finger, C2H2-like
Protein Ontology	PR:000017631	zinc finger protein 106

References

(Earliest) J:10078 Roopenian DC, et al., Responses against antigens encoded by the H-3 histocompatibility locus: antigens stimulating class I MHC- and class II MHC-restricted T cells are encoded by separate genes. Immunogenetics. 1989;30(5):335-43
(Latest) J:201630 Ryder E, et al., Molecular characterization of mutant mouse strains generated from the EUCOMM/KOMP-CSD ES cell resource. Mamm Genome. 2013 Aug;24(7-8):286-94
All references(50)

Other
accession IDs

MGD-MRK-25981, MGI:104549