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Zfp106 Gene Detail
Summary
  • Symbol
    Zfp106
  • Name
    zinc finger protein 106
  • Synonyms
    Cd-1, H3a, Sh3bp3, sirm
  • Feature Type
    protein coding gene
  • IDs
    MGI:1270153
    NCBI Gene: 20402
  • Gene Overview
    MyGene.info: ZNF106
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:120506830-120563853 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 60.37 cM, cytoband F1
  • Mapping Data
    8 experiments
Strain
Comparison
more
  • SNPs within 2kb
    427 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1270153
 protein coding gene Chr2:120506820-120563853 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026368
 protein coding gene Chr2:123376819-123430501 (-)
A/J MGP_AJ_G0026329
 protein coding gene Chr2:118321689-118380653 (-)
AKR/J MGP_AKRJ_G0026308
 protein coding gene Chr2:121624775-121683479 (-)
BALB/cJ MGP_BALBcJ_G0026342
 protein coding gene Chr2:118564020-118618302 (-)
C3H/HeJ MGP_C3HHeJ_G0026088
 protein coding gene Chr2:122113970-122174428 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026789
 protein coding gene Chr2:127400747-127456501 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024169
 protein coding gene Chr2:113341479-113394831 (-)
CAST/EiJ MGP_CASTEiJ_G0025550
 protein coding gene Chr2:122416632-122474328 (-)
CBA/J MGP_CBAJ_G0026064
 protein coding gene Chr2:131860208-131918956 (-)
DBA/2J MGP_DBA2J_G0026203
 protein coding gene Chr2:117714816-117770571 (-)
FVB/NJ MGP_FVBNJ_G0026165
 protein coding gene Chr2:116550418-116604849 (-)
LP/J MGP_LPJ_G0026304
 protein coding gene Chr2:123634509-123694953 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026184
 protein coding gene Chr2:136166321-136223919 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026844
 protein coding gene Chr2:121755998-121814394 (-)
PWK/PhJ MGP_PWKPhJ_G0025286
 protein coding gene Chr2:117317568-117372859 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025085
 protein coding gene Chr2:120950886-121002193 (-)
WSB/EiJ MGP_WSBEiJ_G0025619
 protein coding gene Chr2:122589619-122645877 (-)



Homology
more
  • Human Ortholog
    ZNF106, zinc finger protein 106
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ZNF106, zinc finger protein 106
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SH3BP3, ZFP106, ZNF474
  • Links
    NCBI Gene ID: 64397
    neXtProt AC: NX_Q9H2Y7
    UniProt: Q9H2Y7

  • Chr Location
    15q15.1; chr15:42412437-42491197 (-)  GRCh38.p7
Human Diseases
more
  • Diseases
    1 with Zfp106 mouse models

Human Disease Mouse Models
      
IDs
 View 1 model
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    57 phenotypes from 5 alleles in 4 genetic backgrounds
    22 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit an abnormal gait, progressive motor deficits, kyphosis, weight loss, severe adult-onset degenerative sensory-motor axonopathy, mitochondrial dysfunction, and premature death.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    94
  • Tissues
    46
  • cDNA Data
    26
  • Literature Summary
    6
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 20402 NCBI Gene Model | MGI Sequence Detail 57024 C57BL/6J ±  kb
    transcript NM_011743 RefSeq | MGI Sequence Detail 9137 C57BL/6  
    polypeptide O88466 UniProt | EBI | MGI Sequence Detail 1888 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      9 Sequences
    • InterPro Domains
      IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat
      IPR001680 WD40 repeat
      IPR017986 WD40-repeat-containing domain
      IPR036322 WD40-repeat-containing domain superfamily
      IPR015943 WD40/YVTN repeat-like-containing domain superfamily
      IPR013087 Zinc finger C2H2-type
    Molecular
    Reagents
    less
    • All nucleic 36
      Genomic 4
      cDNA 27
      Primer pair 5

      Microarray probesets 9
    Other
    Accession IDs
    less
    MGD-MRK-25981, MGI:104549
    References
    more
    • Summaries
      All 55
      Developmental Gene Expression 6
      Diseases 1
      Gene Ontology 5
      Phenotypes 22
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:249035 Kannan M, et al., WD40-repeat 47, a microtubule-associated protein, is essential for brain development and autophagy. Proc Natl Acad Sci U S A. 2017 Oct 31;114(44):E9308-E9317
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    01/08/2019
    MGI 6.13     		The Jackson Laboratory