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Ifna4
Gene Detail
Symbol

Name
ID
Member of
Ifna4
interferon alpha 4
MGI:107664
Ifna cluster
Synonyms
Ifa4
Feature Type
protein coding gene
Genetic Map
Chromosome 4
42.03 cM
Detailed Genetic Map ± 1 cM

Sequence Map
Chr4:88841861-88842421 bp, + strand
From VEGA annotation of GRCm38

  561 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: interferon
Gene Tree: Ifna4
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Ifna4 interacts with 6 markers (Mir128-1, Mir128-2, Mir207, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (19 annotations)
Process adaptive immune response, B cell differentiation, ...
Component extracellular region, extracellular space
Function cytokine activity, cytokine receptor binding, ...
External Resources: FuncBase
Expression
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) Genomic(6) cDNA(5) Other(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000011263 (Evidence)
Ensembl Gene ModelENSMUSG00000070904 (Evidence)
Entrez Gene15967 (Evidence)
UniGene377088
DFCITC1635175
DoTSDT.110839419
Consensus CDS ProjectCCDS18346.1
International Mouse Knockout Project StatusIfna4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011263 VEGA Gene Model | MGI Sequence Detail 561 C57BL/6J ±  kb
transcript OTTMUST00000026401 VEGA | MGI Sequence Detail 561 Not Applicable 
polypeptide OTTMUSP00000012085 VEGA | MGI Sequence Detail 186 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(40 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012351 Four-helical cytokine, core
InterPro IPR009079 Four-helical cytokine-like, core
InterPro IPR000471 Interferon alpha/beta/delta
Protein Ontology PR:000008917 interferon alpha-4
References
(Earliest) J:7878 Zwarthoff EC, et al., Organization, structure and expression of murine interferon alpha genes. Nucleic Acids Res. 1985 Feb 11;13(3):791-804
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)
Other
accession IDs
MGD-MRK-11205, MGD-MRK-36239

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory