Molecular Function Biological Process
No experimental evidence to support Biological Process
annotation, following literature review.
See J:73796.
Cellular Component Click cells to view annotations.
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Transcription Start Site | Location | Distance from Gene 5'-end |
Tssr2916 | Chr9:65368194-65368199 (+) | -32 bp |
Tssr85703 | Chr9:65368208-65368265 (+) | 8 bp |
Tssr85704 | Chr9:65368266-65368275 (+) | 42 bp |
Tssr85705 | Chr9:65368603-65368633 (+) | 389 bp |
Tssr85706 | Chr9:65369820-65369824 (+) | 1,593 bp |
Tssr85707 | Chr9:65369947-65369954 (+) | 1,722 bp |
Tssr85708 | Chr9:65370077-65370122 (+) | 1,871 bp |
QTL | Genetic Location* | Genome Location (GRCm39) | Reference | QTL Note |
Ap5q | Chr9, 25.70 cM | Chr9:47053164-47053277 | J:98587 | Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to 6 previously identified alcohol-related QTLs to identify potential candidate genes. Two different Affymetrix microarrays were used in the analysis. Brain expression data from parental strains and 56 (DBA/2J x C57BL/6J)F2 intercross animals were used for analysis. On mouse Chromosome 9, several candidate genes were identified for Ap5q at 26 cM. The highest priority candidate genes identified for Ap5q are Sorl1, Sc5d, Spg21 (40 cM, formerly D9Wsu18e), and Arpp19. Other candidate genes with a ranking of modest priority were identified but are not listed here. |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/12/2024 MGI 6.23 |
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