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Rangap1 Gene Detail
Summary
  • Symbol
    Rangap1
  • Name
    RAN GTPase activating protein 1
  • Synonyms
    Fug1
  • Feature Type
    protein coding gene
  • IDs
    MGI:103071
    NCBI Gene: 19387
  • Gene Overview
    MyGene.info: RANGAP1
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:81704248-81730798 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 38.21 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    172 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103071
protein coding gene Chr15:81704248-81745530 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022118
protein coding gene Chr15:82158590-82187729 (-)
A/J MGP_AJ_G0022079
protein coding gene Chr15:79260484-79285579 (-)
AKR/J MGP_AKRJ_G0022054
protein coding gene Chr15:81454995-81480859 (-)
BALB/cJ MGP_BALBcJ_G0022085
protein coding gene Chr15:79305120-79330084 (-)
C3H/HeJ MGP_C3HHeJ_G0021856
protein coding gene Chr15:81471108-81500354 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022528
protein coding gene Chr15:85384303-85413814 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020057
protein coding gene Chr15:75719088-75743910 (-)
CAST/EiJ MGP_CASTEiJ_G0021376
protein coding gene Chr15:82241288-82270440 (-)
CBA/J MGP_CBAJ_G0021820
protein coding gene Chr15:88038499-88070592 (-)
DBA/2J MGP_DBA2J_G0021950
protein coding gene Chr15:78739401-78764447 (-)
FVB/NJ MGP_FVBNJ_G0021927
protein coding gene Chr15:77778385-77803262 (-)
LP/J MGP_LPJ_G0022018
protein coding gene Chr15:82309254-82336956 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021948
protein coding gene Chr15:92986838-93013878 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022542
protein coding gene Chr15:81546483-81575968 (-)
PWK/PhJ MGP_PWKPhJ_G0021118
protein coding gene Chr15:78776993-78802530 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020955
protein coding gene Chr15:81339671-81366311 (-)
WSB/EiJ MGP_WSBEiJ_G0021428
protein coding gene Chr15:81964260-81992662 (-)



Homology
more
  • Human Ortholog
    RANGAP1, Ran GTPase activating protein 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RANGAP1, Ran GTPase activating protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Fug1, RANGAP, SD
  • Links
    NCBI Gene ID: 5905
    neXtProt AC: NX_P46060
    UniProt: P46060

  • Chr Location
    22q13.2; chr22:41244777-41302213 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotypes from 1 allele in 1 genetic background
    28 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in embryo arrest at the egg cylinder stage and lethality by E8.5. The appearance of the proamniotic cavity is delayed and epiblast cells surrounding the cavity are disorganized. Mesoderm and placental development is impaired.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 19387 NCBI Gene Model | MGI Sequence Detail 26551 C57BL/6J ±  kb
    transcript NM_001358622 RefSeq | MGI Sequence Detail 3163 C57BL/6  
    polypeptide P46061 UniProt | EBI | MGI Sequence Detail 589 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 26
      Genomic 1
      cDNA 22
      Primer pair 1
      Other 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGD-MRK-16762, MGD-MRK-23935, MGI:2146294
    References
    more
    • Summaries
      All 66
      Developmental Gene Expression 9
      Diseases 1
      Gene Ontology 5
      Phenotypes 28
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    11/06/2018
    MGI 6.13
    The Jackson Laboratory