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Mapping Data
Experiment
  • Experiment
    TEXT-QTL-Candidate Genes
  • Chromosome
    2
  • Reference
    J:98595 Kerns RT, et al., Ethanol-responsive brain region expression networks: implications for behavioral responses to acute ethanol in DBA/2J versus C57BL/6J mice. J Neurosci. 2005 Mar 2;25(9):2255-66
  • ID
    MGI:3580118
Genes
GeneAlleleAssay TypeDescription
Actre2 reported elsewhere
Dlx1
Frzb
Atg13
Cd82
Actre3 reported elsewhere
Bdnf
Actre4 reported elsewhere
Actc1
Alcp1 reported elsewhere
Pbx3
Hspa5
Rprm
Pkp4
Marchf7
Notes
  • Experiment
    Microarray analysis was used to identify genes showing alcohol-induced differential expression between inbred strains C57BL/6J and DBA/2J. These genes were then correlated to alcohol-related QTLs to identify potential candidate genes. The experiment involved identifying genes expressed differentially in alcohol-induced and non-induced animals but the following list of candidate genes are only for alcohol-induced states.

    On mouse Chromosome 2, several candidate genes were identified for Actre2 at 48 cM,Actre3 at 63 cM, Actre4 at 65 cM, and Alcp1 at 37 cM. Candidate genes for Actre2 are Dlx1 (44 cM), Frzb (49.75 cM), D2Ertd391e, and Kai1 (49.6 cM). Candidate genes for Actre3 and Actre4 are Bdnf (62 cM) and Actc1 (64 cM), respectively. Candidate genes forAlcp1 are Pbx3 (22 cM), Hspa5 (22.5 cM), Rprm, Pkp4, and March7 (formerly Axot).

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
04/06/2021
MGI 6.16
The Jackson Laboratory