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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TGM2 HGNC:11778 (HGNC)
7052 (Entrez Gene)
190196 (OMIM)
TGM2 (Alliance of Genome Resources)
Chr20 q11.23 Chr20:38127385-38168475 (-)
GRCh38
P21980 (UniProt | EBI)
NM_004613 (RefSeq)
mouse Tgm2 MGI:98731 (MGI)
21817 (Entrez Gene)
Gene Tree
Tgm2 (Alliance of Genome Resources)
Chr2 78.72 cM Chr2:157958325-157988312 (-)
GRCm39
maturity-onset diabetes of the young
21817 (NCBI Gene Model)
P21981 (UniProt | EBI)
NM_009373 (RefSeq)
rat Tgm2 RGD:621081 (Rat Genome Database)
56083 (Entrez Gene)
Tgm2 (Alliance of Genome Resources)
Chr3 q42 Q9WVJ6 (UniProt | EBI)
NM_019386 (RefSeq)
zebrafish tgm2a ZDB-GENE-040912-78 (Zebrafish Model Organism Database)
447909 (Entrez Gene)
tgm2a (Alliance of Genome Resources)
Chr23 NP_001004647 (RefSeq)
NM_001004647 (RefSeq)
tgm2b ZDB-GENE-030131-2576 (Zebrafish Model Organism Database)
323856 (Entrez Gene)
tgm2b (Alliance of Genome Resources)
Chr6 NP_997821 (RefSeq)
NM_212656 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory