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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MTHFD1 HGNC:7432 (HGNC)
4522 (Entrez Gene)
172460 (OMIM)
MTHFD1 (Alliance of Genome Resources)
Chr14 q23.3 Chr14:64388031-64463457 (+)
GRCh38
abdominal aortic aneurysm
cleft lip
cleft palate
developmental cardiac valvular defect
Down syndrome
neural tube defect
spina bifida
tetralogy of Fallot
P11586 (UniProt | EBI)
NM_005956 (RefSeq)
mouse Mthfd1 MGI:1342005 (MGI)
108156 (Entrez Gene)
Gene Tree
Mthfd1 (Alliance of Genome Resources)
Chr12 33.52 cM Chr12:76302072-76366577 (+)
GRCm39
ENSMUSG00000021048 (Ensembl Gene Model)
ENSMUSP00000021443 (Ensembl)
ENSMUST00000021443 (Ensembl)
rat Mthfd1 RGD:708531 (Rat Genome Database)
64300 (Entrez Gene)
Mthfd1 (Alliance of Genome Resources)
Chr6 q24 P27653 (UniProt | EBI)
NM_022508 (RefSeq)
Mthfd1-ps1 RGD:1591768 (Rat Genome Database)
680432 (Entrez Gene)
Mthfd1-ps1 (Alliance of Genome Resources)
Chr3 q36 XP_063141058 (RefSeq)
zebrafish mthfd1a ZDB-GENE-041001-127 (Zebrafish Model Organism Database)
567587 (Entrez Gene)
mthfd1a (Alliance of Genome Resources)
Chr20 XP_695978 (RefSeq)
mthfd1b ZDB-GENE-020905-4 (Zebrafish Model Organism Database)
260441 (Entrez Gene)
mthfd1b (Alliance of Genome Resources)
Chr17 NP_955823 (RefSeq)
NM_199529 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/09/2024
MGI 6.23
The Jackson Laboratory