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Gene Expression Data
Assay Details
Assay
Reference: J:171281 Nakagawa S, et al., Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice. J Cell Biol. 2011 Apr 4;193(1):31-9
Assay type: RNA in situ
MGI Accession ID: MGI:5770397
Gene symbol: Neat1
Gene name: nuclear paraspeckle assembly transcript 1 (non-protein coding)
Probe: RIKEN clone 2310043N10
Probe preparation: labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 1B stomach: postnatal adult (more )
Structure Level Pattern Image Note
TS28: stomach Present 1B stomach NEAT1 Authors report widespread expression.
Specimen 1B intestine: postnatal adult (more )
Structure Level Pattern Image Note
TS28: intestine Present 1B intestine NEAT1 Authors report widespread expression.
Specimen 1B liver: postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Present 1B liver NEAT1 Authors report widespread expression.
Specimen 1B lung: postnatal adult (more )
Structure Level Pattern Image Note
TS28: lung Present 1B lung NEAT1 Authors report widespread expression.
Specimen 1B kidney: postnatal adult (more )
Structure Level Pattern Image Note
TS28: metanephros Present 1B kidney NEAT1 Authors report widespread expression.
Specimen 1B muscle: postnatal adult (more )
Structure Level Pattern Image Note
TS28: musculature Present 1B muscle NEAT1 Authors report widespread expression.
Specimen 1B heart: postnatal adult (more )
Structure Level Pattern Image Note
TS28: heart Present 1B heart NEAT1 Authors report widespread expression.
Specimen 1B brain: postnatal adult (more )
Structure Level Pattern Image Note
TS28: brain Present 1B brain NEAT1 Authors report widespread expression.
Specimen 1D G. ridge: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: urogenital ridge Weak 1D G. ridge NEAT1 Faint expression in a small number of cells.
Specimen 1D hindgut: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: hindgut Weak 1D hindgut NEAT1 Faint expression in a small number of cells.
Specimen 2A: postnatal adult (more )
Note: Zymogenic region of stomach.
Structure Level Pattern Image Note
TS28: stomach epithelium Present 2A NEAT1 Authors report widespread expression.
Specimen 3E WT stomach: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: stomach Present 3E WT stomach NEAT1
Specimen 3E KO stomach: embryonic day 18.5; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Structure Level Pattern Image Note
TS26: stomach Trace 3E KO stomach NEAT1 Dramatic decrease in expression compared with wild type embryos.
Specimen 3E WT intestine: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: intestine Present 3E WT intestine NEAT1
Specimen 3E KO intestine: embryonic day 18.5; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Structure Level Pattern Image Note
TS26: intestine Weak 3E KO intestine NEAT1 Dramatic decrease in expression compared with wild type embryos.
Specimen 5A WT: postnatal adult (more )
Note: Zymogenic region of stomach.
Structure Level Pattern Image Note
TS28: stomach epithelium Present 5A WT NEAT1 Broadly expressed in surface epithelial cells, parietal cells and zymogenic cells.
Specimen 5A KO: postnatal adult; Neat1tm1.1Shna/Neat1tm1.1Shna (more )
Note: Zymogenic region of stomach.
Structure Level Pattern Image Note
TS28: stomach epithelium Absent 5A KO NEAT1
Specimen S1 esophagus: postnatal adult (more )
Structure Level Pattern Image Note
TS28: esophagus Present S1_esophagus NEAT1 Authors report widespread expression.
Specimen S1 forestomach: postnatal adult (more )
Structure Level Pattern Image Note
TS28: stomach proventricular region Present S1_forestomach NEAT1 Authors report widespread expression.
Specimen S1 colon: postnatal adult (more )
Structure Level Pattern Image Note
TS28: colon Present S1_colon NEAT1 Authors report widespread expression.
Specimen S1 salivary g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: salivary gland Present S1_salivary g. NEAT1 Authors report widespread expression.
Specimen S1 adrenal g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: adrenal gland Present S1_adrenal g. NEAT1 Authors report widespread expression.
Specimen S1 Harderian g.: postnatal adult (more )
Structure Level Pattern Image Note
TS28: Harderian gland Present S1_Harderian g. NEAT1 Authors report widespread expression.
Specimen S1 pancreas: postnatal adult (more )
Structure Level Pattern Image Note
TS28: pancreas Present S1_pancreas NEAT1 Authors report widespread expression.
Specimen S1 bladder: postnatal adult (more )
Structure Level Pattern Image Note
TS28: bladder Present S1_bladder NEAT1 Authors report widespread expression.
Specimen S1 skin: postnatal adult (more )
Structure Level Pattern Image Note
TS28: skin Present S1_skin NEAT1 Authors report widespread expression.
Specimen S1 spleen: postnatal adult (more )
Structure Level Pattern Image Note
TS28: spleen Present S1_spleen NEAT1 Authors report widespread expression.
Specimen S1 ovary: postnatal adult (more )
Structure Level Pattern Image Note
TS28: ovary Present S1_ovary NEAT1 Authors report widespread expression.
Specimen S1 testis: postnatal adult (more )
Structure Level Pattern Image Note
TS28: testis Present S1_testis NEAT1 Authors report widespread expression.
Specimen S2A Liver (1): postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Present S2A Liver (1) NEAT1 Authors state expression levels were highly variable between animals in certain tissues such as liver.
Specimen S2B Liver (2): postnatal adult (more )
Structure Level Pattern Image Note
TS28: liver Present S2B Liver (2) NEAT1 Authors state expression levels were highly variable between animals in certain tissues such as liver.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory