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Rhox4f Gene Detail
Summary
  • Symbol
    Rhox4f
  • Name
    reproductive homeobox 4F
  • Synonyms
    Rhox4.6
Location &
Maps
more
  • Sequence Map
    ChrX:36784548-36789339 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3613392
 protein coding gene ChrX:36784547-36789357 (-)
129S1/SvImJ ENSMUSG00200021447
 protein coding gene ChrX:20715815-20720611 (-)
A/J ENSMUSG00195024435
 protein coding gene ChrX:23406361-23411173 (-)
AKR/J no annotation
BALB/cJ ENSMUSG00180012624
 protein coding gene ChrX:21153065-21157877 (-)
C3H/HeJ ENSMUSG00175023614
 protein coding gene ChrX:24146292-24151104 (-)
C57BL/6NJ ENSMUSG00215021130
 protein coding gene ChrX:21114112-21118922 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210031543
 protein coding gene ChrX:21460433-21465243 (-)
DBA/2J ENSMUSG00185023384
 protein coding gene ChrX:32140981-32145791 (-)
FVB/NJ ENSMUSG00205022817
 protein coding gene ChrX:20092631-20097443 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230011983
 protein coding gene ChrX:38633448-38638244 (-)
NOD/ShiLtJ ENSMUSG00190021275
 protein coding gene ChrX:20581422-20586232 (-)
NZO/HlLtJ ENSMUSG00225039230
 protein coding gene ChrX:43839932-43844742 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005036995
 protein coding gene ChrX:21616861-21621670 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 636177 NCBI Gene Model | MGI Sequence Detail 4792 C57BL/6J ±  kb
transcript NM_001039696 RefSeq | MGI Sequence Detail 929 C57BL/6  
polypeptide NP_001034785 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001356 Homeodomain
    IPR009057 Homeodomain-like superfamily
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:96937 Maclean JA 2nd, et al., Rhox: a new homeobox gene cluster. Cell. 2005 Feb 11;120(3):369-82
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory