Arhgef11 MGI Mouse Gene Detail - MGI:2441869 - Rho guanine nucleotide exchange factor 11

Symbol

Arhgef11
Name

Rho guanine nucleotide exchange factor 11
Synonyms

PDZ-RhoGEF, Prg

Feature Type

protein coding gene
IDs

MGI:2441869
NCBI Gene: 213498
Alliance

genome feature page
Transcription Start Sites

4 TSS

Sequence Map

Chr3:87524866-87645341 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 3, 38.22 cM
Mapping Data

1 experiment

SNPs within 2kb

2765 from dbSNP Build 142
Strain Annotations

19

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2441869	protein coding gene	Chr3:87524855-87645346 (+)
129S1/SvImJ	ENSMUSG00200037875	protein coding gene	Chr3:84379529-84500369 (+)
A/J	ENSMUSG00195052005	protein coding gene	Chr3:84402558-84523359 (+)
AKR/J	ENSMUSG00220046552	protein coding gene	Chr3:84350298-84471203 (+)
BALB/cJ	ENSMUSG00180042460	protein coding gene	Chr3:84519900-84640803 (+)
C3H/HeJ	ENSMUSG00175045723	protein coding gene	Chr3:84330332-84451125 (+)
C57BL/6NJ	ENSMUSG00215046636	protein coding gene	Chr3:84767253-84888089 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0025137	protein coding gene	Chr3:80371531-80498749 (+)
CAST/EiJ	ENSTCUG00005046327	protein coding gene	Chr3:83858576-83979732 (+)
CBA/J	ENSMUSG00210042111	protein coding gene	Chr3:84473333-84594143 (+)
DBA/2J	ENSMUSG00185050620	protein coding gene	Chr3:84608636-84729530 (+)
FVB/NJ	ENSMUSG00205036789	protein coding gene	Chr3:83397691-83518482 (+)
JF1/MsJ	ENSUMUG00000006909	protein coding gene	Chr3:84151377-84272234 (+)
LP/J	ENSMUSG00230032904	protein coding gene	Chr3:86600984-86721817 (+)
NOD/ShiLtJ	ENSMUSG00190047985	protein coding gene	Chr3:84849969-84971709 (+)
NZO/HlLtJ	ENSMUSG00225006810	protein coding gene	Chr3:89355741-89476526 (+)
PWK/PhJ	ENSLUMG00010040349	protein coding gene	Chr3:84243963-84362430 (+)
SPRET/EiJ	ENSMSPG00010045795	protein coding gene	Chr3:85071352-85193642 (+)
WSB/EiJ	ENSIUOG00005049949	protein coding gene	Chr3:84845805-84966531 (+)

Human Ortholog

ARHGEF11, Rho guanine nucleotide exchange factor 11

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

ARHGEF11, Rho guanine nucleotide exchange factor 11
Synonyms

GTRAP48, PDZ-RHOGEF
Links

HGNC:14580

NCBI Gene ID: 9826

UniProt: O15085
Chr Location

1q23.1; chr1:156934840-157046903 (-) GRCh38

MGI Vertebrate Homology

Arhgef11 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: ARHGEF11
Gene Tree

Arhgef11

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References

1 with disease annotations

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Phenotype Summary

16 phenotypes from 3 alleles in 3 genetic backgrounds
15 phenotypes from multigenic genotypes
2 images
19 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

34
Chemically induced (other)

1
Endonuclease-mediated

2
Gene trapped

25
Radiation induced

1
Targeted

5
Genomic Mutations

2 involving Arhgef11
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

77 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

Mice homozygous for a knock-out allele exhibit no obvious phenotype.

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All GO Annotations

16
GO References

5

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

638
Tissues

28
cDNA Data

14
Literature Summary

7

Images

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

GEISHA ARHGEF11

Xenbase arhgef11

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All Sequences

102
RefSeq

49
UniProt

9
CCDS

CCDS38472.1

Ensembl

ENSMUSG00000041977 (Evidence)
NCBI Gene

213498

			Length	Strain/Species	Flank
genomic	ENSMUSG00000041977	Ensembl Gene Model \| MGI Sequence Detail	120476	C57BL/6J	± kb
transcript	ENSMUST00000039476	Ensembl \| MGI Sequence Detail	6776	Not Applicable
polypeptide	ENSMUSP00000039900	Ensembl \| MGI Sequence Detail	1552	Not Applicable

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UniProt

9 Sequences
InterPro Domains

IPR041020 ARHGEF1-like, PH domain

IPR035899 Dbl homology (DH) domain superfamily

IPR000219 Dbl homology domain

IPR001331 Guanine-nucleotide dissociation stimulator, CDC24, conserved site

IPR001478 PDZ domain

IPR036034 PDZ superfamily

IPR011993 PH-like domain superfamily

IPR001849 Pleckstrin homology domain

IPR015212 Regulator of G protein signalling-like domain

IPR016137 RGS domain

IPR036305 RGS domain superfamily

IPR044926 RGS, subdomain 2

IPR037803 Rho guanine nucleotide exchange factor 11, PH domain

IPR037889 Rho guanine nucleotide exchange factor 11, RGS domain
GlyGen

Q68FM7 3 sites, 1 N-linked glycan (1 site)

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All nucleic 16

cDNA 15

Primer pair 1

Antibodies 1

Microarray probesets 2

Summaries

All 58

Developmental Gene Expression 7

Diseases 1

Gene Ontology 5

Phenotypes 19
Earliest

J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Arhgef11:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29826	Chr3:87524848-87524920 (+)	18 bp
Tssr29827	Chr3:87528224-87528229 (+)	3,361 bp
Tssr29828	Chr3:87536794-87536803 (+)	11,933 bp
Tssr29829	Chr3:87558267-87558270 (+)	33,403 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24