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Ctsq Gene Detail
Summary
  • Symbol
    Ctsq
  • Name
    cathepsin Q
  • Synonyms
    1600010J02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2137385
    NCBI Gene: 104002
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:61182852-61188411 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 32.65 cM, cytoband B3
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    17
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2137385
 protein coding gene Chr13:61182838-61188445 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020657
 protein coding gene Chr13:60816019-60821521 (-)
A/J MGP_AJ_G0020612
 protein coding gene Chr13:58526320-58531924 (-)
AKR/J MGP_AKRJ_G0020587
 protein coding gene Chr13:60266999-60272351 (-)
BALB/cJ MGP_BALBcJ_G0020608
 protein coding gene Chr13:58775340-58782285 (-)
C3H/HeJ MGP_C3HHeJ_G0020405
 protein coding gene Chr13:60068292-60073742 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021042
 protein coding gene Chr13:62620806-62628248 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019921
 protein coding gene Chr13:60298897-60304493 (-)
CBA/J MGP_CBAJ_G0020365
 protein coding gene Chr13:64972239-64977616 (-)
DBA/2J MGP_DBA2J_G0020489
 protein coding gene Chr13:58067333-58072787 (-)
FVB/NJ MGP_FVBNJ_G0020467
 protein coding gene Chr13:57560657-57566427 (-)
LP/J MGP_LPJ_G0020565
 protein coding gene Chr13:61039197-61044630 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020497
 protein coding gene Chr13:64246117-64252643 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021085
 protein coding gene Chr13:59877530-59882982 (-)
PWK/PhJ MGP_PWKPhJ_G0019674
 protein coding gene Chr13:58098691-58104352 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019503
 protein coding gene Chr13:58817769-58823246 (-)
WSB/EiJ MGP_WSBEiJ_G0019982
 protein coding gene Chr13:60342163-60348735 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    760
  • Tissues
    33
  • cDNA Data
    47
  • Literature Summary
    44
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 104002 NCBI Gene Model | MGI Sequence Detail 5560 C57BL/6J ±  kb
transcript NM_029636 RefSeq | MGI Sequence Detail 1330 ZRU/MplStud  
polypeptide NP_083912 RefSeq | MGI Sequence Detail 343 ZRU/MplStud  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR013201 Cathepsin propeptide inhibitor domain (I29)
    IPR025661 Cysteine peptidase, asparagine active site
    IPR025660 Cysteine peptidase, histidine active site
    IPR039417 Papain-like cysteine endopeptidase
    IPR038765 Papain-like cysteine peptidase superfamily
    IPR013128 Peptidase C1A
    IPR000668 Peptidase C1A, papain C-terminal
Molecular
Reagents
less
  • All nucleic 53
    cDNA 48
    Primer pair 4
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1923753
References
more
  • Summaries
    All 72
    Developmental Gene Expression 44
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:376309 Viscomi MP, et al., Embryonic and placental factors are linked with the development of autism-like behaviors in the BTBR mouse model. Neuroscience. 2025 Dec 5;593:18-28
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/09/2026
MGI 6.24 		The Jackson Laboratory