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Usp8 Gene Detail
Summary
  • Symbol
    Usp8
  • Name
    ubiquitin specific peptidase 8
  • Synonyms
    mKIAA0055, Ubpy
  • Feature Type
    protein coding gene
  • IDs
    MGI:1934029
    NCBI Gene: 84092
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:126549248-126601217 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 61.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    470 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1934029
 protein coding gene Chr2:126549123-126601234 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026443
 protein coding gene Chr2:129940671-129997199 (+)
A/J MGP_AJ_G0026406
 protein coding gene Chr2:124672286-124728872 (+)
AKR/J MGP_AKRJ_G0026382
 protein coding gene Chr2:128240367-128291993 (+)
BALB/cJ MGP_BALBcJ_G0026419
 protein coding gene Chr2:124949417-125001548 (+)
C3H/HeJ MGP_C3HHeJ_G0026162
 protein coding gene Chr2:128744506-128796385 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026864
 protein coding gene Chr2:134066127-134124133 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024241
 protein coding gene Chr2:119399377-119451705 (+)
CAST/EiJ MGP_CASTEiJ_G0025623
 protein coding gene Chr2:128957542-129011310 (+)
CBA/J MGP_CBAJ_G0026142
 protein coding gene Chr2:138987925-139044980 (+)
DBA/2J MGP_DBA2J_G0026276
 protein coding gene Chr2:124087286-124143786 (+)
FVB/NJ MGP_FVBNJ_G0026240
 protein coding gene Chr2:122739900-122791637 (+)
LP/J MGP_LPJ_G0026381
 protein coding gene Chr2:130192067-130246921 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026260
 protein coding gene Chr2:143050864-143105685 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026919
 protein coding gene Chr2:128266710-128328884 (+)
PWK/PhJ MGP_PWKPhJ_G0025359
 protein coding gene Chr2:123629211-123681700 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025161
 protein coding gene Chr2:127346009-127399560 (+)
WSB/EiJ MGP_WSBEiJ_G0025697
 protein coding gene Chr2:129150040-129204787 (+)



Homology
more
  • Human Ortholog
    USP8, ubiquitin specific peptidase 8
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    USP8, ubiquitin specific peptidase 8
  • Synonyms
    HumORF8, PITA4, SPG59, UBPY
  • Links
    NCBI Gene ID: 9101
    neXtProt AC: NX_P40818
    UniProt: P40818

  • Chr Location
    15q21.2; chr15:50424380-50514421 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human USP8 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotypes from 2 alleles in 2 genetic backgrounds
    15 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Embryos homozygous for a knock-out allele appear severely growth retarded and disorganized at E9.5 and die in utero due to ventral-folding defects.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    55
  • GO References
    15
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    851
  • Tissues
    118
  • cDNA Data
    15
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000027363 Ensembl Gene Model | MGI Sequence Detail 51970 C57BL/6J ±  kb
    transcript ENSMUST00000110416 Ensembl | MGI Sequence Detail 4154 Not Applicable  
    polypeptide ENSMUSP00000106046 Ensembl | MGI Sequence Detail 1091 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 15

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2139005, MGI:2139401
    References
    more
    • Summaries
      All 61
      Developmental Gene Expression 2
      Gene Ontology 15
      Phenotypes 15
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory