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1700020L24Rik Gene Detail
Summary
  • Symbol
    1700020L24Rik
  • Name
    RIKEN cDNA 1700020L24 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913580
    NCBI Gene: 66330
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:83328520-83332058 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 50.38 cM, cytoband B5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    20 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913580
 protein coding gene Chr11:83328503-83332059 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018848
 protein coding gene Chr11:84759025-84763508 (+)
A/J MGP_AJ_G0018815
 protein coding gene Chr11:81547798-81551298 (+)
AKR/J MGP_AKRJ_G0018785
 protein coding gene Chr11:83973380-83976685 (+)
BALB/cJ MGP_BALBcJ_G0018788
 protein coding gene Chr11:81959077-81962419 (+)
C3H/HeJ MGP_C3HHeJ_G0018602
 protein coding gene Chr11:84033043-84036347 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019240
 protein coding gene Chr11:87358173-87362480 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016874
 protein coding gene Chr11:78674717-78678150 (+)
CAST/EiJ MGP_CASTEiJ_G0018157
 protein coding gene Chr11:84609629-84613043 (+)
CBA/J MGP_CBAJ_G0018573
 protein coding gene Chr11:91135586-91141474 (+)
DBA/2J MGP_DBA2J_G0018681
 protein coding gene Chr11:81144308-81147663 (+)
FVB/NJ MGP_FVBNJ_G0018670
 protein coding gene Chr11:80627245-80630614 (+)
LP/J MGP_LPJ_G0018751
 protein coding gene Chr11:85324982-85328074 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018697
 protein coding gene Chr11:91300801-91304153 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019280
 protein coding gene Chr11:84242902-84247579 (+)
PWK/PhJ MGP_PWKPhJ_G0017926
 protein coding gene Chr11:81904295-81908066 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017718
 protein coding gene Chr11:83780926-83785999 (+)
WSB/EiJ MGP_WSBEiJ_G0018208
 protein coding gene Chr11:84107512-84112194 (+)



Homology
more
  • Human Ortholog
    C17orf50, chromosome 17 open reading frame 50
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C17orf50, chromosome 17 open reading frame 50
  • Links
    NCBI Gene ID: 146853
    neXtProt AC: NX_Q8WW18
    UniProt: Q8WW18

  • Chr Location
    17q12; chr17:35760887-35765079 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving 1700020L24Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66330 NCBI Gene Model | MGI Sequence Detail 3539 C57BL/6J ±  kb
transcript NM_025492 RefSeq | MGI Sequence Detail 931 C57BL/6  
polypeptide Q8C1R3 UniProt | EBI | MGI Sequence Detail 189 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    Genomic 1
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory