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Asic2 Gene Detail
Summary
  • Symbol
    Asic2
  • Name
    acid-sensing ion channel 2
  • Synonyms
    Accn1, BNaC1a, BNC1, Mdeg
  • Feature Type
    protein coding gene
  • IDs
    MGI:1100867
    NCBI Gene: 11418
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:80770989-81859222 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 48.43 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5381 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1100867
 protein coding gene Chr11:80770989-81859283 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018818
 protein coding gene Chr11:82066272-83206063 (-)
A/J MGP_AJ_G0018785
 protein coding gene Chr11:78919061-80007593 (-)
AKR/J MGP_AKRJ_G0018755
 protein coding gene Chr11:81263889-82401362 (-)
BALB/cJ MGP_BALBcJ_G0018758
 protein coding gene Chr11:79313572-80405242 (-)
C3H/HeJ MGP_C3HHeJ_G0018572
 protein coding gene Chr11:81344638-82455472 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019210
 protein coding gene Chr11:84569351-85708868 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016844
 protein coding gene Chr11:75841652-76979011 (-)
CAST/EiJ MGP_CASTEiJ_G0018127
 protein coding gene Chr11:81831643-83006256 (-)
CBA/J MGP_CBAJ_G0018543
 protein coding gene Chr11:88289256-89466971 (-)
DBA/2J MGP_DBA2J_G0018651
 protein coding gene Chr11:78473028-79571290 (-)
FVB/NJ MGP_FVBNJ_G0018640
 protein coding gene Chr11:78033986-79120119 (-)
LP/J MGP_LPJ_G0018721
 protein coding gene Chr11:82590562-83734880 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018667
 protein coding gene Chr11:88541318-89654076 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019250
 protein coding gene Chr11:81556946-82672654 (-)
PWK/PhJ MGP_PWKPhJ_G0017897
 protein coding gene Chr11:79290533-80395474 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017688
 protein coding gene Chr11:81153352-82285034 (-)
WSB/EiJ MGP_WSBEiJ_G0018179
 protein coding gene Chr11:81393890-82540360 (-)



Homology
more
  • Human Ortholog
    ASIC2, acid sensing ion channel subunit 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ASIC2, acid sensing ion channel subunit 2
  • Synonyms
    ACCN, ACCN1, ASIC2a, BNaC1, BNC1, hBNaC1, MDEG
  • Links
    NCBI Gene ID: 40
    neXtProt AC: NX_Q16515
    UniProt: Q16515

  • Chr Location
    17q11.2-q12; chr17:33013087-34174964 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 3 alleles in 4 genetic backgrounds
    52 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased mechanoreceptor and spiral ganglion electrophysiology and decreased pressure-induced blood vessel constriction. Mice homozygous for a different knock-out allele exhibit retinal degeneration and abnormal eye electrophysiology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    45
  • GO References
    17
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    854
  • Tissues
    39
  • cDNA Data
    12
  • Literature Summary
    6
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 11418 NCBI Gene Model | MGI Sequence Detail 1088234 C57BL/6J ±  kb
    transcript NM_007384 RefSeq | MGI Sequence Detail 3024 ZRU/MplStud  
    polypeptide Q925H0 UniProt | EBI | MGI Sequence Detail 512 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 12
      Primer pair 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 88
      Developmental Gene Expression 6
      Gene Ontology 17
      Phenotypes 52
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory