rs32281322 SNP Detail

Summary

• ID
  rs32281322
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135582184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGTACT TTCCTGAAGG
  CCTTCGGTAC AGCCTCCTTC ACACCACTCC TTTGGCAGAG CTGCTGTTTG GTAAATTGCA
  CAACGTGCCC AAAAGCCTGG TGGTCAAGGG GTGTTGGACT TCTTGCTTTT CTTCTTGGTC
  ATACTCTCAT TCTCTCCGCA GTCCTCATGT TTACCAGAGA CTGTGTGATG TATGTGAGGG
  R
  AGTGATGTGT GCATCTTCTC ACTCATAAGT TTGAACTCCG TAGATATTAA CGCATATAAG
  CCATATTTAA AAACAGGGCG CTGGGCAGTG GTGGCGCACG CCTTTGATCC CAGCACTTGG
  GAGGCACAGG CAGGTGGATT TCTGAGTTCG AGGCCAGCCT GGTCTACAAA GTGAGTTCCA
  GGACAGCCAG GGCTGTACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45629456	mCV24798525	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147552092	ENSMUSSNP1571158	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32281322					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135582184 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15082	CpG island 15082	561 bp proximal
Gm13000	predicted gene 13000	700 bp downstream
Gm57106	predicted gene, 57106	261 bp downstream
Gm69173	predicted gene, 69173	within coordinates
Rr367748	regulatory region 367748	704 bp upstream
Rr398596	regulatory region 398596	952 bp upstream
Rr602159	regulatory region 602159	630 bp distal
Rr602160	regulatory region 602160	282 bp proximal
Rr602161	regulatory region 602161	384 bp proximal
Rr602162	regulatory region 602162	885 bp proximal
Rr602163	regulatory region 602163	1040 bp proximal
Srsf10	serine and arginine-rich splicing factor 10	874 bp upstream
Tssr39638	transcription start site region 39638	834 bp upstream
Tssr39639	transcription start site region 39639	1214 bp upstream
Tssr39640	transcription start site region 39640	1255 bp upstream
Tssr39641	transcription start site region 39641	1369 bp upstream
Tssr39642	transcription start site region 39642	1763 bp upstream
Tssr43999	transcription start site region 43999	996 bp downstream