Gm57106 Gene Detail

Summary

• Symbol
  Gm57106
• Name
  predicted gene, 57106

• Feature Type
  lncRNA gene
• IDs
  MGI:7338125
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:135582445-135583234 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_7338125	lncRNA gene	Chr4:135582445-135583234 (-)
129S1/SvImJ	ENSMUSG00200021270	lncRNA gene	Chr4:129000705-129001493 (-)
A/J	ENSMUSG00195044014	lncRNA gene	Chr4:130354452-130355240 (-)
AKR/J	ENSMUSG00220047592	lncRNA gene	Chr4:129347848-129348634 (-)
BALB/cJ	ENSMUSG00180050163	lncRNA gene	Chr4:127987029-127987815 (-)
C3H/HeJ	ENSMUSG00175047132	lncRNA gene	Chr4:129007101-129007887 (-)
C57BL/6NJ	ENSMUSG00215052512	lncRNA gene	Chr4:130522267-130523053 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048722	lncRNA gene	Chr4:129924278-129925067 (-)
CBA/J	ENSMUSG00210053890	lncRNA gene	Chr4:128631012-128631798 (-)
DBA/2J	ENSMUSG00185053401	lncRNA gene	Chr4:130160356-130161142 (-)
FVB/NJ	ENSMUSG00205048962	lncRNA gene	Chr4:128403756-128404542 (-)
JF1/MsJ	ENSUMUG00000049301	lncRNA gene	Chr4:130857052-130857840 (-)
LP/J	ENSMUSG00230041879	lncRNA gene	Chr4:133938985-133939773 (-)
NOD/ShiLtJ	ENSMUSG00190048789	lncRNA gene	Chr4:128392506-128393292 (-)
NZO/HlLtJ	ENSMUSG00225027066	lncRNA gene	Chr4:139893826-139894614 (-)
PWK/PhJ	ENSLUMG00010050296	lncRNA gene	Chr4:127839178-127839964 (-)
SPRET/EiJ	ENSMSPG00010045750	lncRNA gene	Chr4:129905583-129906367 (-)
WSB/EiJ	ENSIUOG00005045755	lncRNA gene	Chr4:128294759-128295545 (-)

Homology

• Gene Tree
  Gm57106
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000120823 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120823	Ensembl Gene Model | MGI Sequence Detail	790	C57BL/6J
transcript	ENSMUST00000245979	Ensembl | MGI Sequence Detail	790	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm57106:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr43999	Chr4:135583180-135583208 (-)	40 bp