rs32155426 SNP Detail

Summary

• ID
  rs32155426
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135581453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGAAACT ACAGTGTCGT
  GGCCTTGGAG GTCACTTATG GATGGTACGT AGACCATAGA AGGGGGTAAA GCAAAAATTG
  CCTGGAATAT TCCTATTTCT CTGCAGGATG TAATGGGTGG AGAAGTAGGC GGAACAGATC
  ATCTTCACAC AGCAGGAGAG AGAGATGATT GACAGGCACA CTGTACACCC AAGCTGCTCA
  M
  AGAGAAGGCT CCAGTGCAAC ATGTTATGTA AATACACCTA TCTCAATGGT GACAGCCAGA
  AGCAGTTGGC TGATGGGAGC TCATCTACGT GGTTGAATCT TCCTGGGTTG CTACTGAAAT
  TACAGTGCCT TTCTTAAGAA ATGTTCATTT ATTGGGTTAC ATCGATCTGC CAGCCAGTCG
  GGTATTTCTA ATCCTCCCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45613851	mCV24798526	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss147552067	ENSMUSSNP1664571	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32155426					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135581453 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15082	CpG island 15082	1292 bp proximal
Gm13000	predicted gene 13000	within coordinates
Gm57106	predicted gene, 57106	992 bp downstream
Gm69173	predicted gene, 69173	within coordinates
Rr367748	regulatory region 367748	1435 bp upstream
Rr398596	regulatory region 398596	1683 bp upstream
Rr602158	regulatory region 602158	1354 bp distal
Rr602159	regulatory region 602159	within coordinates
Rr602160	regulatory region 602160	1013 bp proximal
Rr602161	regulatory region 602161	1115 bp proximal
Rr602162	regulatory region 602162	1616 bp proximal
Rr602163	regulatory region 602163	1771 bp proximal
Srsf10	serine and arginine-rich splicing factor 10	1605 bp upstream
Tssr39638	transcription start site region 39638	1565 bp upstream
Tssr39639	transcription start site region 39639	1945 bp upstream
Tssr39640	transcription start site region 39640	1986 bp upstream
Tssr43999	transcription start site region 43999	1727 bp downstream