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5' Otf3 probe Probe Detail
Nucleotide
Probe/Clone
  • Name
    5' Otf3 probe
  • Sequence Type
    cDNA
  • ID
    MGI:18175
  • Region Covered
    encodes the first 9 amino acids of the POU specific domain
  • Insert Site
    EcoRI/PstI
  • Insert Size
    449bp
Source
  • Species
    mouse, laboratory
Genes
Pou5f1-rs8 POU domain, class 5, transcription factor 1, related sequence 8
Pou5f1-rs5 POU domain, class 5, transcription factor 1, related sequence 5
Pou5f1-rs4 POU domain, class 5, transcription factor 1, related sequence 4
Pou5f1-rs3 POU domain, class 5, transcription factor 1, related sequence 3
Pou5f1-rs2 POU domain, class 5, transcription factor 1, related sequence 2
Pou5f1 POU domain, class 5, transcription factor 1
Polymorphisms
J:11320 Siracusa LD, et al., Genomics. 1991 Jun;10(2):313-26
Notes: Only diagnostic fragment sizes given.
Endonuclease Gene Allele Fragments Strains
BamHI Pou5f1 a 6.1kb C3H/HeJ
b 5.1,1.4kb C57BL/6J
EcoRI Pou5f1 b absent C57BL/6J
s 9.2kb M. spretus
EcoRI Pou5f1-rs2 b absent C57BL/6J
s 3.9kb M. spretus
EcoRI Pou5f1-rs3 b absent C57BL/6J
s 5.8kb M. spretus
EcoRI Pou5f1-rs4 b absent C57BL/6J
s 2.8kb M. spretus
EcoRI Pou5f1-rs5 b absent C57BL/6J
s 8.0kb M. spretus
EcoRI Pou5f1-rs8 b absent C57BL/6J
s 2.4kb M. spretus
References
J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory