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Pou5f1-rs3 Pseudogene Detail
Summary
  • Symbol
    Pou5f1-rs3
  • Name
    POU domain, class 5, transcription factor 1, related sequence 3
  • Synonyms
    Gm2071, Otf3c, Otf3-rs3
Location &
Maps
more
  • Sequence Map
    Chr3:3894344-3895117 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 1.96 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    19
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_101890
 pseudogene Chr3:3894005-3895284 (+)
129S1/SvImJ ENSMUSG00200000954
 pseudogene Chr3:580703-581476 (+)
A/J ENSMUSG00195001245
 pseudogene Chr3:914747-915520 (+)
AKR/J ENSMUSG00220017060
 pseudogene Chr3:899813-900586 (+)
BALB/cJ ENSMUSG00180007298
 pseudogene Chr3:907078-907851 (+)
C3H/HeJ ENSMUSG00175005093
 pseudogene Chr3:910396-911169 (+)
C57BL/6NJ ENSMUSG00215005339
 pseudogene Chr3:893310-894083 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010717
 pseudogene Chr3:427819-428597 (+)
CAST/EiJ ENSTCUG00005000239
 pseudogene Chr3:973741-974515 (+)
CBA/J ENSMUSG00210000863
 pseudogene Chr3:905029-905802 (+)
DBA/2J ENSMUSG00185000518
 pseudogene Chr3:898413-899186 (+)
FVB/NJ ENSMUSG00205006041
 pseudogene Chr3:747772-748545 (+)
JF1/MsJ ENSUMUG00000010674
 pseudogene Chr3:928735-929509 (+)
LP/J ENSMUSG00230000112
 pseudogene Chr3:2820805-2821578 (+)
NOD/ShiLtJ ENSMUSG00190023978
 pseudogene Chr3:898411-899184 (+)
NZO/HlLtJ ENSMUSG00225001515
 pseudogene Chr3:5359779-5360552 (+)
PWK/PhJ ENSLUMG00010008325
 pseudogene Chr3:936228-937002 (+)
SPRET/EiJ ENSMSPG00010000152
 pseudogene Chr3:804216-804627 (+)
WSB/EiJ ENSIUOG00005000793
 pseudogene Chr3:892370-893143 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000103245 Ensembl Gene Model | MGI Sequence Detail 774 C57BL/6J ±  kb
transcript ENSMUST00000193335 Ensembl | MGI Sequence Detail 774 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-13073, MGD-MRK-18716, MGD-MRK-19412, MGI:3780238
References
more
  • Summaries
    All 8
  • Earliest
    J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory